The 2.0 version of rSNPBase

Variant report

Variant rs1976981
Chromosome Location chr6:131364349-131364350
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:30 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:131346000-131375000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
2 chr6:131351400-131375000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
3 chr6:131351600-131374600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
4 chr6:131352400-131374400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
5 chr6:131356600-131375000 Weak transcription Brain Angular Gyrus brain
6 chr6:131357400-131367200 Weak transcription Fetal Intestine Small intestine
7 chr6:131359000-131374800 Weak transcription Sigmoid Colon Sigmoid Colon
8 chr6:131360400-131365600 Weak transcription Adipose Nuclei Adipose
9 chr6:131360400-131367400 Weak transcription Brain Inferior Temporal Lobe brain
10 chr6:131360600-131367200 Weak transcription Brain Hippocampus Middle brain
11 chr6:131360800-131364800 Enhancers HepG2 liver
12 chr6:131360800-131368000 Weak transcription Small Intestine intestine
13 chr6:131360800-131370000 Weak transcription Brain Cingulate Gyrus brain
14 chr6:131360800-131374800 Weak transcription HSMM muscle
15 chr6:131360800-131375000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
16 chr6:131361000-131367600 Weak transcription Brain Substantia Nigra brain
17 chr6:131361400-131373800 Weak transcription Fetal Muscle Leg muscle
18 chr6:131361600-131369000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
19 chr6:131362200-131364400 Enhancers Fetal Stomach stomach
20 chr6:131362400-131364400 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
21 chr6:131362800-131366600 Weak transcription Brain Anterior Caudate brain
22 chr6:131363200-131364400 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
23 chr6:131363600-131364400 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
24 chr6:131363800-131371400 Weak transcription Muscle Satellite Cultured Cells --
25 chr6:131364000-131364400 Enhancers Ovary ovary
26 chr6:131364000-131364600 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
27 chr6:131364000-131364800 Enhancers NHDF-Ad bronchial
28 chr6:131364000-131372200 Weak transcription NHLF lung
29 chr6:131364200-131364400 Enhancers Fetal Muscle Trunk muscle
30 chr6:131364200-131370000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived

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Last update: Aug 31, 2015