The 2.0 version of rSNPBase

Variant report

Variant rs2178282
Chromosome Location chr6:131362448-131362449
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:33 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:131346000-131375000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
2 chr6:131351400-131375000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
3 chr6:131351600-131374600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
4 chr6:131352400-131374400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
5 chr6:131353800-131364000 Weak transcription Ovary ovary
6 chr6:131356600-131375000 Weak transcription Brain Angular Gyrus brain
7 chr6:131357400-131367200 Weak transcription Fetal Intestine Small intestine
8 chr6:131359000-131374800 Weak transcription Sigmoid Colon Sigmoid Colon
9 chr6:131360400-131365600 Weak transcription Adipose Nuclei Adipose
10 chr6:131360400-131367400 Weak transcription Brain Inferior Temporal Lobe brain
11 chr6:131360600-131362800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
12 chr6:131360600-131363400 Weak transcription A549 lung
13 chr6:131360600-131367200 Weak transcription Brain Hippocampus Middle brain
14 chr6:131360800-131363200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
15 chr6:131360800-131364000 Enhancers NHLF lung
16 chr6:131360800-131364800 Enhancers HepG2 liver
17 chr6:131360800-131368000 Weak transcription Small Intestine intestine
18 chr6:131360800-131370000 Weak transcription Brain Cingulate Gyrus brain
19 chr6:131360800-131374800 Weak transcription HSMM muscle
20 chr6:131360800-131375000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
21 chr6:131361000-131362800 Weak transcription Muscle Satellite Cultured Cells --
22 chr6:131361000-131367600 Weak transcription Brain Substantia Nigra brain
23 chr6:131361400-131373800 Weak transcription Fetal Muscle Leg muscle
24 chr6:131361600-131369000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
25 chr6:131361800-131362600 Enhancers Fetal Lung lung
26 chr6:131362000-131363000 Enhancers NHDF-Ad bronchial
27 chr6:131362000-131363400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
28 chr6:131362000-131364000 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
29 chr6:131362000-131364200 Enhancers Osteobl bone
30 chr6:131362200-131362600 Weak transcription Brain Anterior Caudate brain
31 chr6:131362200-131363000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
32 chr6:131362200-131364400 Enhancers Fetal Stomach stomach
33 chr6:131362400-131364400 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell

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Last update: Aug 31, 2015