Variant report

Variant rs1977576
Chromosome Location chr6:131306472-131306473
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:26 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:131288200-131306600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr6:131298800-131314800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
3 chr6:131299000-131309800 Weak transcription HepG2 liver
4 chr6:131300400-131312200 Weak transcription Fetal Adrenal Gland Adrenal Gland
5 chr6:131300400-131314600 Weak transcription Small Intestine intestine
6 chr6:131303800-131315400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
7 chr6:131304000-131312600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
8 chr6:131304200-131313400 Weak transcription K562 blood
9 chr6:131304400-131312200 Weak transcription Fetal Stomach stomach
10 chr6:131305000-131306600 Weak transcription Colon Smooth Muscle Colon
11 chr6:131305600-131307000 ZNF genes & repeats GM12878-XiMat blood
12 chr6:131305800-131306800 ZNF genes & repeats Primary B cells from peripheral blood blood
13 chr6:131305800-131309600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
14 chr6:131306200-131306600 Weak transcription Brain Substantia Nigra brain
15 chr6:131306200-131306600 Weak transcription Left Ventricle heart
16 chr6:131306200-131306800 ZNF genes & repeats Breast Myoepithelial Primary Cells Breast
17 chr6:131306200-131306800 ZNF genes & repeats Fetal Intestine Small intestine
18 chr6:131306200-131306800 ZNF genes & repeats Fetal Muscle Leg muscle
19 chr6:131306200-131306800 ZNF genes & repeats Thymus Thymus
20 chr6:131306200-131306800 ZNF genes & repeats NHLF lung
21 chr6:131306200-131307200 ZNF genes & repeats Dnd41 blood
22 chr6:131306400-131306600 Genic enhancers IMR90 fetal lung fibroblasts Cell Line lung
23 chr6:131306400-131306800 Genic enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
24 chr6:131306400-131306800 ZNF genes & repeats iPS DF 19.11 Cell Line embryonic stem cell
25 chr6:131306400-131306800 ZNF genes & repeats Foreskin Fibroblast Primary Cells skin01 Skin
26 chr6:131306400-131307000 ZNF genes & repeats HUES64 Cell Line embryonic stem cell

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