The 2.0 version of rSNPBase

Variant report

Variant rs1985404
Chromosome Location chr19:36585420-36585421
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:98 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:36546600-36602200 Weak transcription Colonic Mucosa Colon
2 chr19:36546600-36604800 Weak transcription Rectal Mucosa Donor 31 rectum
3 chr19:36546800-36588000 Weak transcription ES-WA7 Cell Line embryonic stem cell
4 chr19:36546800-36592200 Weak transcription Placenta Amnion Placenta Amnion
5 chr19:36546800-36601400 Weak transcription Rectal Mucosa Donor 29 rectum
6 chr19:36548200-36596400 Strong transcription H1 Cell Line embryonic stem cell
7 chr19:36555000-36593000 Weak transcription Fetal Lung lung
8 chr19:36556000-36601600 Weak transcription Pancreas Pancrea
9 chr19:36561200-36587800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
10 chr19:36561200-36597600 Strong transcription HUES64 Cell Line embryonic stem cell
11 chr19:36561200-36597600 Strong transcription iPS-18 Cell Line embryonic stem cell
12 chr19:36561200-36597600 Strong transcription Dnd41 blood
13 chr19:36561200-36598200 Strong transcription HUES6 Cell Line embryonic stem cell
14 chr19:36561200-36598400 Strong transcription HUES48 Cell Line embryonic stem cell
15 chr19:36561400-36587800 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
16 chr19:36561400-36596400 Strong transcription iPS-20b Cell Line embryonic stem cell
17 chr19:36561400-36596600 Strong transcription Primary neutrophils fromperipheralblood blood
18 chr19:36562000-36588600 Strong transcription Monocytes-CD14+_RO01746 blood
19 chr19:36563000-36594200 Weak transcription HSMM muscle
20 chr19:36566000-36592000 Weak transcription HMEC breast
21 chr19:36568600-36598000 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
22 chr19:36568800-36594800 Strong transcription A549 lung
23 chr19:36568800-36601400 Weak transcription Primary T helper cells fromperipheralblood blood
24 chr19:36570000-36598000 Strong transcription Fetal Thymus thymus
25 chr19:36571600-36586400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
26 chr19:36571600-36596600 Strong transcription H9 Cell Line embryonic stem cell
27 chr19:36571800-36588400 Strong transcription Fetal Adrenal Gland Adrenal Gland
28 chr19:36571800-36588600 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
29 chr19:36571800-36591400 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
30 chr19:36571800-36598400 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
31 chr19:36571800-36600000 Strong transcription Primary hematopoietic stem cells short term culture blood
32 chr19:36571800-36600600 Strong transcription Fetal Stomach stomach
33 chr19:36572000-36598000 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
34 chr19:36572200-36586400 Strong transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
35 chr19:36572200-36586600 Strong transcription Cortex derived primary cultured neurospheres brain
36 chr19:36572200-36588200 Strong transcription Fetal Muscle Leg muscle
37 chr19:36572400-36585800 Strong transcription Fetal Intestine Small intestine
38 chr19:36572400-36588400 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
39 chr19:36572400-36588400 Strong transcription Fetal Muscle Trunk muscle
40 chr19:36572400-36602400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
41 chr19:36572800-36586000 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
42 chr19:36573800-36602400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
43 chr19:36574200-36593600 Weak transcription Primary T regulatory cells fromperipheralblood blood
44 chr19:36574200-36602000 Weak transcription Sigmoid Colon Sigmoid Colon
45 chr19:36574400-36592600 Weak transcription HUVEC blood vessel
46 chr19:36574600-36604400 Weak transcription NHDF-Ad bronchial
47 chr19:36574800-36587800 Weak transcription NH-A brain
48 chr19:36575400-36604200 Weak transcription Primary B cells from cord blood blood
49 chr19:36578800-36586600 Strong transcription ES-I3 Cell Line embryonic stem cell
50 chr19:36580000-36590400 Weak transcription Skeletal Muscle Male skeletal muscle

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Last update: Aug 31, 2015