The 2.0 version of rSNPBase

Variant report

Variant rs3746271
Chromosome Location chr19:36581263-36581264
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:92 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:36546400-36584000 Weak transcription Right Atrium heart
2 chr19:36546600-36602200 Weak transcription Colonic Mucosa Colon
3 chr19:36546600-36604800 Weak transcription Rectal Mucosa Donor 31 rectum
4 chr19:36546800-36588000 Weak transcription ES-WA7 Cell Line embryonic stem cell
5 chr19:36546800-36592200 Weak transcription Placenta Amnion Placenta Amnion
6 chr19:36546800-36601400 Weak transcription Rectal Mucosa Donor 29 rectum
7 chr19:36547600-36584200 Weak transcription Fetal Heart heart
8 chr19:36548200-36596400 Strong transcription H1 Cell Line embryonic stem cell
9 chr19:36555000-36593000 Weak transcription Fetal Lung lung
10 chr19:36556000-36601600 Weak transcription Pancreas Pancrea
11 chr19:36561200-36587800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
12 chr19:36561200-36597600 Strong transcription HUES64 Cell Line embryonic stem cell
13 chr19:36561200-36597600 Strong transcription iPS-18 Cell Line embryonic stem cell
14 chr19:36561200-36597600 Strong transcription Dnd41 blood
15 chr19:36561200-36598200 Strong transcription HUES6 Cell Line embryonic stem cell
16 chr19:36561200-36598400 Strong transcription HUES48 Cell Line embryonic stem cell
17 chr19:36561400-36587800 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
18 chr19:36561400-36596400 Strong transcription iPS-20b Cell Line embryonic stem cell
19 chr19:36561400-36596600 Strong transcription Primary neutrophils fromperipheralblood blood
20 chr19:36562000-36588600 Strong transcription Monocytes-CD14+_RO01746 blood
21 chr19:36562200-36585000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
22 chr19:36563000-36594200 Weak transcription HSMM muscle
23 chr19:36564800-36584600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
24 chr19:36566000-36592000 Weak transcription HMEC breast
25 chr19:36568600-36598000 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
26 chr19:36568800-36594800 Strong transcription A549 lung
27 chr19:36568800-36601400 Weak transcription Primary T helper cells fromperipheralblood blood
28 chr19:36570000-36598000 Strong transcription Fetal Thymus thymus
29 chr19:36570200-36585200 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
30 chr19:36571200-36583800 Weak transcription Primary T cells fromperipheralblood blood
31 chr19:36571600-36584600 Strong transcription Thymus Thymus
32 chr19:36571600-36586400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
33 chr19:36571600-36596600 Strong transcription H9 Cell Line embryonic stem cell
34 chr19:36571800-36588400 Strong transcription Fetal Adrenal Gland Adrenal Gland
35 chr19:36571800-36588600 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
36 chr19:36571800-36591400 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
37 chr19:36571800-36598400 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
38 chr19:36571800-36600000 Strong transcription Primary hematopoietic stem cells short term culture blood
39 chr19:36571800-36600600 Strong transcription Fetal Stomach stomach
40 chr19:36572000-36598000 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
41 chr19:36572200-36585400 Strong transcription Primary monocytes fromperipheralblood blood
42 chr19:36572200-36586400 Strong transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
43 chr19:36572200-36586600 Strong transcription Cortex derived primary cultured neurospheres brain
44 chr19:36572200-36588200 Strong transcription Fetal Muscle Leg muscle
45 chr19:36572400-36585800 Strong transcription Fetal Intestine Small intestine
46 chr19:36572400-36588400 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
47 chr19:36572400-36588400 Strong transcription Fetal Muscle Trunk muscle
48 chr19:36572400-36602400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
49 chr19:36572800-36583800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
50 chr19:36572800-36586000 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin

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Last update: Aug 31, 2015