Variant report

Variant rs1989935
Chromosome Location chr7:27146138-27146139
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:75 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:27137000-27146800 Bivalent/Poised TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
2 chr7:27137600-27149000 Weak transcription HepG2 liver
3 chr7:27142600-27147600 Weak transcription Sigmoid Colon Sigmoid Colon
4 chr7:27142800-27149000 Weak transcription NHDF-Ad bronchial
5 chr7:27143800-27146600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
6 chr7:27144000-27147800 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
7 chr7:27145000-27146400 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
8 chr7:27145000-27146400 Flanking Active TSS NHLF lung
9 chr7:27145000-27148000 Bivalent Enhancer ES-UCSF4 Cell Line embryonic stem cell
10 chr7:27145000-27148600 Strong transcription A549 lung
11 chr7:27145200-27148600 Weak transcription Osteobl bone
12 chr7:27145400-27146200 Flanking Bivalent TSS/Enh Fetal Lung lung
13 chr7:27145400-27146800 Flanking Bivalent TSS/Enh HUES6 Cell Line embryonic stem cell
14 chr7:27145400-27148600 Active TSS Rectal Smooth Muscle rectum
15 chr7:27145400-27149000 Weak transcription Spleen Spleen
16 chr7:27145600-27146200 Flanking Bivalent TSS/Enh iPS-15b Cell Line embryonic stem cell
17 chr7:27145600-27146200 Bivalent Enhancer NH-A brain
18 chr7:27145600-27147000 Flanking Active TSS HUVEC blood vessel
19 chr7:27145600-27148600 Active TSS Breast Myoepithelial Primary Cells Breast
20 chr7:27145600-27148800 Active TSS Duodenum Smooth Muscle Duodenum
21 chr7:27145600-27152400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
22 chr7:27145800-27146200 Bivalent/Poised TSS ES-WA7 Cell Line embryonic stem cell
23 chr7:27145800-27146200 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
24 chr7:27145800-27146200 Bivalent Enhancer Ganglion Eminence derived primary cultured neurospheres brain
25 chr7:27145800-27146200 Active TSS Skeletal Muscle Male skeletal muscle
26 chr7:27145800-27146600 Bivalent Enhancer Brain Hippocampus Middle brain
27 chr7:27145800-27146600 Flanking Active TSS HMEC breast
28 chr7:27145800-27146600 Active TSS HSMMtube muscle
29 chr7:27145800-27146800 Flanking Active TSS Muscle Satellite Cultured Cells --
30 chr7:27145800-27146800 Flanking Active TSS Adipose Nuclei Adipose
31 chr7:27145800-27147000 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
32 chr7:27145800-27147600 Bivalent/Poised TSS Fetal Intestine Small intestine
33 chr7:27145800-27148000 Bivalent Enhancer H1 Cell Line embryonic stem cell
34 chr7:27145800-27148200 Active TSS Right Atrium heart
35 chr7:27145800-27148400 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
36 chr7:27145800-27148600 Active TSS Aorta Aorta
37 chr7:27145800-27151000 Transcr. at gene 5' and 3' Fetal Stomach stomach
38 chr7:27145800-27162800 Strong transcription Primary hematopoietic stem cells short term culture blood
39 chr7:27146000-27146200 Flanking Bivalent TSS/Enh ES-I3 Cell Line embryonic stem cell
40 chr7:27146000-27146200 Bivalent Enhancer H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
41 chr7:27146000-27146200 Flanking Active TSS H1 Derived Mesenchymal Stem Cells ES cell derived
42 chr7:27146000-27146200 Flanking Bivalent TSS/Enh H9 Cell Line embryonic stem cell
43 chr7:27146000-27146200 Flanking Bivalent TSS/Enh iPS-18 Cell Line embryonic stem cell
44 chr7:27146000-27146200 Bivalent Enhancer iPS DF 19.11 Cell Line embryonic stem cell
45 chr7:27146000-27146200 Bivalent Enhancer Brain Inferior Temporal Lobe brain
46 chr7:27146000-27146200 Flanking Active TSS Colonic Mucosa Colon
47 chr7:27146000-27146200 Active TSS Esophagus oesophagus
48 chr7:27146000-27146200 Bivalent/Poised TSS Fetal Kidney kidney
49 chr7:27146000-27146200 Flanking Bivalent TSS/Enh Fetal Muscle Leg muscle
50 chr7:27146000-27146200 Flanking Active TSS HSMM muscle

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