Variant report

Variant rs199570565
Chromosome Location chr17:18314534-18314535
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:102 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:18312600-18315400 Active TSS Brain Germinal Matrix brain
2 chr17:18312800-18314800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
3 chr17:18313000-18315400 Active TSS Fetal Brain Female brain
4 chr17:18313000-18315400 Active TSS Fetal Stomach stomach
5 chr17:18313200-18315400 Active TSS Fetal Thymus thymus
6 chr17:18313400-18315400 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
7 chr17:18313400-18315400 Active TSS HUES6 Cell Line embryonic stem cell
8 chr17:18313400-18315400 Active TSS iPS-15b Cell Line embryonic stem cell
9 chr17:18313400-18315400 Active TSS iPS-20b Cell Line embryonic stem cell
10 chr17:18313400-18315400 Active TSS Ganglion Eminence derived primary cultured neurospheres brain
11 chr17:18313400-18315400 Active TSS Thymus Thymus
12 chr17:18313600-18315400 Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
13 chr17:18313600-18315400 Active TSS HUES64 Cell Line embryonic stem cell
14 chr17:18313600-18315400 Active TSS A549 lung
15 chr17:18313600-18315400 Active TSS NH-A brain
16 chr17:18313800-18315200 Active TSS Colon Smooth Muscle Colon
17 chr17:18313800-18315200 Active TSS Fetal Brain Male brain
18 chr17:18313800-18315400 Active TSS ES-I3 Cell Line embryonic stem cell
19 chr17:18313800-18315400 Active TSS H9 Cell Line embryonic stem cell
20 chr17:18313800-18315400 Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
21 chr17:18313800-18315400 Active TSS H9 Derived Neuron Cultured Cells ES cell derived
22 chr17:18313800-18315400 Active TSS IMR90 fetal lung fibroblasts Cell Line lung
23 chr17:18313800-18315400 Active TSS iPS-18 Cell Line embryonic stem cell
24 chr17:18313800-18315400 Active TSS ES-UCSF4 Cell Line embryonic stem cell
25 chr17:18313800-18315400 Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
26 chr17:18313800-18315400 Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
27 chr17:18313800-18315400 Active TSS Cortex derived primary cultured neurospheres brain
28 chr17:18313800-18315400 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
29 chr17:18313800-18315400 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
30 chr17:18313800-18315400 Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
31 chr17:18313800-18315400 Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
32 chr17:18313800-18315400 Active TSS Adipose Nuclei Adipose
33 chr17:18313800-18315400 Active TSS Fetal Intestine Small intestine
34 chr17:18313800-18315400 Active TSS Fetal Kidney kidney
35 chr17:18313800-18315400 Active TSS Fetal Lung lung
36 chr17:18313800-18315400 Active TSS Fetal Muscle Trunk muscle
37 chr17:18313800-18315400 Active TSS Fetal Muscle Leg muscle
38 chr17:18313800-18315400 Active TSS NHLF lung
39 chr17:18313800-18316600 Active TSS HUES48 Cell Line embryonic stem cell
40 chr17:18313800-18316800 Active TSS H1 Cell Line embryonic stem cell
41 chr17:18314000-18314600 Active TSS Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
42 chr17:18314000-18314800 Enhancers Primary B cells from cord blood blood
43 chr17:18314000-18315200 Active TSS Brain Inferior Temporal Lobe brain
44 chr17:18314000-18315200 Active TSS Brain Dorsolateral Prefrontal Cortex brain
45 chr17:18314000-18315200 Active TSS Duodenum Mucosa Duodenum
46 chr17:18314000-18315400 Active TSS H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
47 chr17:18314000-18315400 Active TSS H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
48 chr17:18314000-18315400 Active TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
49 chr17:18314000-18315400 Active TSS iPS DF 6.9 Cell Line embryonic stem cell
50 chr17:18314000-18315400 Active TSS iPS DF 19.11 Cell Line embryonic stem cell

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