| No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
| 1 |
nsv531997 |
chr5:179107599-179588082 |
Enhancers Strong transcription Flanking Active TSS ZNF genes & repeats Weak transcription Genic enhancers Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site
|
339 gene(s)
|
inside rSNPs
|
diseases
|
| 2 |
nsv1030437 |
chr5:179235423-179649944 |
Enhancers Strong transcription Flanking Active TSS Active TSS Weak transcription ZNF genes & repeats Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site
|
189 gene(s)
|
inside rSNPs
|
diseases
|
| 3 |
nsv537982 |
chr5:179235423-179649944 |
Active TSS Weak transcription Flanking Active TSS Genic enhancers Strong transcription Bivalent/Poised TSS Enhancers Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site
|
189 gene(s)
|
inside rSNPs
|
diseases
|
| 4 |
nsv948909 |
chr5:179249099-179772640 |
Weak transcription Active TSS Flanking Active TSS Enhancers Strong transcription ZNF genes & repeats Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site
|
175 gene(s)
|
inside rSNPs
|
diseases
|
| 5 |
nsv830561 |
chr5:179365637-179537012 |
Weak transcription Enhancers ZNF genes & repeats Strong transcription Flanking Active TSS Genic enhancers Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site
|
153 gene(s)
|
inside rSNPs
|
diseases
|
| 6 |
nsv1033706 |
chr5:179402769-179806356 |
Strong transcription Weak transcription Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Genic enhancers
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site
|
165 gene(s)
|
inside rSNPs
|
diseases
|
| 7 |
nsv1021754 |
chr5:179522070-179547579 |
Enhancers Bivalent Enhancer ZNF genes & repeats Weak transcription Genic enhancers Flanking Active TSS Bivalent/Poised TSS Strong transcription Active TSS
|
TF binding regionCpG islandChromatin interactive region
|
4 gene(s)
|
inside rSNPs
|
diseases
|
| 8 |
esv3452016 |
chr5:179522371-179524519 |
Weak transcription Enhancers
|
Chromatin interactive region
|
1 gene(s)
|
inside rSNPs
|
diseases
|
| 9 |
esv3340676 |
chr5:179522894-179523392 |
Weak transcription Enhancers
|
Chromatin interactive region
|
n/a
|
inside rSNPs
|
diseases
|
| 10 |
esv3419875 |
chr5:179522946-179524094 |
Weak transcription Enhancers
|
Chromatin interactive region
|
n/a
|
inside rSNPs
|
diseases
|
| 11 |
esv2222166 |
chr5:179522974-179523428 |
Weak transcription Enhancers
|
Chromatin interactive region
|
n/a
|
inside rSNPs
|
diseases
|
| 12 |
esv3434902 |
chr5:179523083-179523362 |
Weak transcription
|
Chromatin interactive region
|
n/a
|
inside rSNPs
|
diseases
|
