Variant report

Variant	rs200471416
Chromosome Location	chr10:18486714-18486715
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1039174	chr10:18474463-18493676	Enhancers Flanking Active TSS Weak transcription Active TSS Strong transcription Bivalent Enhancer	n/a	n/a	inside rSNPs	diseases
2	esv3321902	chr10:18486496-18487844	Enhancers Weak transcription Active TSS Flanking Active TSS	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:26 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:18469400-18491200	Weak transcription	Primary hematopoietic stem cells	blood
2	chr10:18475200-18491600	Weak transcription	Pancreatic Islets	Pancreatic Islet
3	chr10:18481800-18490200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
4	chr10:18483600-18487800	Enhancers	Rectal Smooth Muscle	rectum
5	chr10:18484800-18486800	Enhancers	iPS-18 Cell Line	embryonic stem cell
6	chr10:18484800-18486800	Enhancers	Colon Smooth Muscle	Colon
7	chr10:18484800-18487600	Enhancers	Stomach Smooth Muscle	stomach
8	chr10:18485000-18503800	Weak transcription	Duodenum Smooth Muscle	Duodenum
9	chr10:18485800-18486800	Enhancers	Fetal Stomach	stomach
10	chr10:18485800-18486800	Enhancers	Ovary	ovary
11	chr10:18486000-18486800	Enhancers	H1 Cell Line	embryonic stem cell
12	chr10:18486000-18486800	Enhancers	Cortex derived primary cultured neurospheres	brain
13	chr10:18486000-18486800	Enhancers	Fetal Intestine Small	intestine
14	chr10:18486000-18486800	Enhancers	Left Ventricle	heart
15	chr10:18486200-18486800	Enhancers	HUES6 Cell Line	embryonic stem cell
16	chr10:18486200-18487000	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
17	chr10:18486600-18486800	Active TSS	iPS-20b Cell Line	embryonic stem cell
18	chr10:18486600-18486800	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
19	chr10:18486600-18487200	Weak transcription	Right Ventricle	heart
20	chr10:18486600-18487400	Enhancers	Right Atrium	heart
21	chr10:18486600-18491000	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
22	chr10:18486600-18491000	Weak transcription	Fetal Heart	heart
23	chr10:18486600-18491200	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
24	chr10:18486600-18491600	Weak transcription	Aorta	Aorta
25	chr10:18486600-18491800	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
26	chr10:18486600-18492200	Weak transcription	Fetal Intestine Large	intestine

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