The 2.0 version of rSNPBase

Variant report

Variant rs2005862
Chromosome Location chr19:28290230-28290231
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:109 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:28285800-28303200 Weak transcription ES-I3 Cell Line embryonic stem cell
2 chr19:28286000-28294400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr19:28286000-28294400 Weak transcription Fetal Kidney kidney
4 chr19:28286000-28296800 Weak transcription NH-A brain
5 chr19:28286000-28297400 Weak transcription H9 Cell Line embryonic stem cell
6 chr19:28286000-28298400 Weak transcription Pancreatic Islets Pancreatic Islet
7 chr19:28286200-28291600 Weak transcription HUES6 Cell Line embryonic stem cell
8 chr19:28286200-28291800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
9 chr19:28286200-28294400 Weak transcription iPS-18 Cell Line embryonic stem cell
10 chr19:28286200-28295800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
11 chr19:28286200-28296400 Weak transcription Muscle Satellite Cultured Cells --
12 chr19:28286200-28296400 Weak transcription Osteobl bone
13 chr19:28286200-28298200 Weak transcription HSMMtube muscle
14 chr19:28286200-28298800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
15 chr19:28286200-28298800 Weak transcription Rectal Mucosa Donor 31 rectum
16 chr19:28286400-28290400 Weak transcription Colon Smooth Muscle Colon
17 chr19:28286400-28291800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
18 chr19:28286400-28294400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
19 chr19:28286400-28294400 Weak transcription Fetal Brain Male brain
20 chr19:28286400-28294400 Weak transcription NHEK skin
21 chr19:28286400-28295800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
22 chr19:28286400-28295800 Weak transcription Fetal Thymus thymus
23 chr19:28286400-28296000 Weak transcription Rectal Smooth Muscle rectum
24 chr19:28286400-28296800 Weak transcription Adipose Nuclei Adipose
25 chr19:28286400-28299400 Weak transcription Brain Anterior Caudate brain
26 chr19:28286600-28294600 Weak transcription Fetal Lung lung
27 chr19:28286600-28295800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
28 chr19:28286600-28295800 Weak transcription Right Ventricle heart
29 chr19:28286600-28296000 Weak transcription Cortex derived primary cultured neurospheres brain
30 chr19:28286600-28296200 Weak transcription Small Intestine intestine
31 chr19:28286600-28296400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
32 chr19:28286600-28297600 Weak transcription Liver Liver
33 chr19:28286600-28298400 Weak transcription Primary T helper naive cells from peripheral blood blood
34 chr19:28286600-28299000 Weak transcription NHLF lung
35 chr19:28286600-28301000 Weak transcription Brain Substantia Nigra brain
36 chr19:28286800-28294400 Weak transcription Fetal Brain Female brain
37 chr19:28286800-28295400 Weak transcription Primary T killer memory cells from peripheral blood blood
38 chr19:28286800-28295800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
39 chr19:28286800-28296000 Weak transcription Brain Hippocampus Middle brain
40 chr19:28286800-28296800 Weak transcription Brain Inferior Temporal Lobe brain
41 chr19:28286800-28296800 Weak transcription Hela-S3 cervix
42 chr19:28286800-28298400 Weak transcription Skeletal Muscle Male skeletal muscle
43 chr19:28286800-28299000 Weak transcription Stomach Smooth Muscle stomach
44 chr19:28286800-28299400 Weak transcription HSMM muscle
45 chr19:28287000-28291400 Weak transcription HepG2 liver
46 chr19:28287000-28294400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
47 chr19:28287000-28294400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
48 chr19:28287000-28295800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
49 chr19:28287000-28297600 Weak transcription Skeletal Muscle Female skeletal muscle
50 chr19:28287000-28297600 Weak transcription NHDF-Ad bronchial

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015