Variant report

Variant rs2005892
Chromosome Location chr2:39586264-39586265
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:84 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:39539000-39586400 Weak transcription Pancreas Pancrea
2 chr2:39541000-39586400 Weak transcription Lung lung
3 chr2:39554600-39586400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
4 chr2:39557000-39586800 Weak transcription Aorta Aorta
5 chr2:39558800-39586600 Weak transcription Rectal Mucosa Donor 31 rectum
6 chr2:39559000-39586400 Weak transcription Duodenum Smooth Muscle Duodenum
7 chr2:39562400-39586600 Weak transcription NHLF lung
8 chr2:39572200-39597600 Weak transcription Osteobl bone
9 chr2:39574200-39586400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
10 chr2:39575600-39586400 Weak transcription Gastric stomach
11 chr2:39579200-39586400 Weak transcription Fetal Thymus thymus
12 chr2:39579200-39587600 Weak transcription Placenta Amnion Placenta Amnion
13 chr2:39580400-39586600 Weak transcription Primary T helper naive cells fromperipheralblood blood
14 chr2:39582400-39586400 Weak transcription Fetal Intestine Large intestine
15 chr2:39582600-39586400 Weak transcription Left Ventricle heart
16 chr2:39582800-39586400 Weak transcription Sigmoid Colon Sigmoid Colon
17 chr2:39582800-39587200 Weak transcription Stomach Smooth Muscle stomach
18 chr2:39583000-39586600 Weak transcription Primary T helper cells fromperipheralblood blood
19 chr2:39583000-39587000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
20 chr2:39583200-39586400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
21 chr2:39583400-39586400 Weak transcription Breast Myoepithelial Primary Cells Breast
22 chr2:39584200-39588400 ZNF genes & repeats hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
23 chr2:39584400-39586400 Weak transcription Ovary ovary
24 chr2:39584400-39598400 Weak transcription Colon Smooth Muscle Colon
25 chr2:39584400-39604600 Weak transcription Right Ventricle heart
26 chr2:39584600-39586400 Weak transcription HSMMtube muscle
27 chr2:39584800-39586400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
28 chr2:39584800-39586400 Weak transcription Brain Anterior Caudate brain
29 chr2:39584800-39586600 Weak transcription Brain Inferior Temporal Lobe brain
30 chr2:39584800-39591600 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
31 chr2:39585000-39586400 Weak transcription Brain Angular Gyrus brain
32 chr2:39585000-39588400 ZNF genes & repeats HUES6 Cell Line embryonic stem cell
33 chr2:39585000-39591400 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
34 chr2:39585200-39586400 Weak transcription Skeletal Muscle Male skeletal muscle
35 chr2:39585200-39590600 ZNF genes & repeats HUES64 Cell Line embryonic stem cell
36 chr2:39585200-39590600 ZNF genes & repeats iPS-20b Cell Line embryonic stem cell
37 chr2:39585200-39591400 ZNF genes & repeats HUES48 Cell Line embryonic stem cell
38 chr2:39585400-39586400 Weak transcription Fetal Adrenal Gland Adrenal Gland
39 chr2:39585400-39586400 Weak transcription HSMM muscle
40 chr2:39585400-39586600 Weak transcription Skeletal Muscle Female skeletal muscle
41 chr2:39585400-39587200 ZNF genes & repeats Ganglion Eminence derived primary cultured neurospheres brain
42 chr2:39585400-39588400 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
43 chr2:39585400-39590200 ZNF genes & repeats iPS-18 Cell Line embryonic stem cell
44 chr2:39585600-39587400 ZNF genes & repeats Pancreatic Islets Pancreatic Islet
45 chr2:39585600-39588000 ZNF genes & repeats Monocytes-CD14+_RO01746 blood
46 chr2:39585600-39588400 ZNF genes & repeats H1 Cell Line embryonic stem cell
47 chr2:39585600-39588400 ZNF genes & repeats Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
48 chr2:39585600-39591600 Weak transcription Fetal Heart heart
49 chr2:39585800-39586400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
50 chr2:39585800-39586800 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived

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