| No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
| 1 |
nsv1006802 |
chr3:161921063-162599175 |
Enhancers Transcr. at gene 5' and 3' Flanking Active TSS Active TSS Weak transcription Genic enhancers ZNF genes & repeats Strong transcription Bivalent Enhancer Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
2 gene(s)
|
inside rSNPs
|
diseases
|
| 2 |
nsv428424 |
chr3:162145988-163033943 |
ZNF genes & repeats Enhancers Weak transcription Strong transcription Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
8 gene(s)
|
inside rSNPs
|
diseases
|
| 3 |
nsv1012160 |
chr3:162182166-162540478 |
Enhancers Flanking Active TSS Weak transcription ZNF genes & repeats Active TSS Genic enhancers Strong transcription Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
2 gene(s)
|
inside rSNPs
|
diseases
|
| 4 |
nsv592201 |
chr3:162188625-163142162 |
Enhancers Active TSS Weak transcription Flanking Active TSS Genic enhancers ZNF genes & repeats Strong transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
8 gene(s)
|
inside rSNPs
|
diseases
|
| 5 |
nsv470994 |
chr3:162217993-162945834 |
Active TSS Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Genic enhancers Strong transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
7 gene(s)
|
inside rSNPs
|
diseases
|
| 6 |
nsv1005142 |
chr3:162284967-162447818 |
Enhancers Active TSS Weak transcription Flanking Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Strong transcription
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
1 gene(s)
|
inside rSNPs
|
diseases
|
| 7 |
nsv877758 |
chr3:162287573-162521339 |
Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS Strong transcription Genic enhancers Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
1 gene(s)
|
inside rSNPs
|
diseases
|
| 8 |
nsv877759 |
chr3:162303276-162521339 |
Enhancers Flanking Active TSS Weak transcription ZNF genes & repeats Active TSS Genic enhancers Strong transcription Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
1 gene(s)
|
inside rSNPs
|
diseases
|
| 9 |
nsv877761 |
chr3:162346392-162521339 |
Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS Genic enhancers Transcr. at gene 5' and 3' Strong transcription
|
Chromatin interactive regionlncRNA
|
n/a
|
inside rSNPs
|
diseases
|
| 10 |
nsv592208 |
chr3:162369863-162437102 |
Enhancers Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS Transcr. at gene 5' and 3'
|
Chromatin interactive region
|
n/a
|
inside rSNPs
|
diseases
|
| 11 |
nsv1005637 |
chr3:162379324-162635451 |
Weak transcription Strong transcription Enhancers Flanking Active TSS ZNF genes & repeats Genic enhancers Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
Chromatin interactive regionlncRNA
|
n/a
|
inside rSNPs
|
diseases
|
| 12 |
nsv877762 |
chr3:162400620-162521339 |
Enhancers Active TSS Weak transcription ZNF genes & repeats Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3' Strong transcription
|
Chromatin interactive regionlncRNA
|
n/a
|
inside rSNPs
|
diseases
|
| 13 |
esv3356838 |
chr3:162407608-162409606 |
Enhancers Weak transcription
|
n/a
|
n/a
|
inside rSNPs
|
n/a
|
Variant overlapped rSNPs/rCNVs (count:13 , 50 per page) page:
1
