| No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
| 1 |
nsv1024455 |
chr5:118770429-119487982 |
Strong transcription Active TSS Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
13 gene(s)
|
inside rSNPs
|
diseases
|
| 2 |
nsv1016271 |
chr5:118836891-119487982 |
Strong transcription Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Active TSS Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
8 gene(s)
|
inside rSNPs
|
diseases
|
| 3 |
nsv882778 |
chr5:118972113-119384039 |
Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Bivalent Enhancer
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
2 gene(s)
|
inside rSNPs
|
diseases
|
| 4 |
nsv427733 |
chr5:119037677-119282381 |
Active TSS Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer ZNF genes & repeats
|
Chromatin interactive regionlncRNA
|
n/a
|
inside rSNPs
|
diseases
|
| 5 |
nsv830462 |
chr5:119124989-119262889 |
Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS Active TSS
|
Chromatin interactive regionlncRNA
|
n/a
|
inside rSNPs
|
diseases
|
| 6 |
nsv965574 |
chr5:119177789-119196537 |
Enhancers Weak transcription Active TSS
|
n/a
|
n/a
|
inside rSNPs
|
n/a
|
| 7 |
esv2763495 |
chr5:119189423-119240003 |
Enhancers Flanking Active TSS Bivalent Enhancer Weak transcription
|
Chromatin interactive regionlncRNA
|
n/a
|
inside rSNPs
|
diseases
|
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Last update: Aug 31, 2015