Variant report

Variant	rs2022624
Chromosome Location	chr14:70925818-70925819
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 17 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:16)

rs_ID	r²[population]
rs11626228	0.81[AMR][1000 genomes]
rs11626414	0.81[AMR][1000 genomes]
rs11628785	0.93[AMR][1000 genomes];0.81[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs12880777	0.85[AMR][1000 genomes]
rs12884918	0.90[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs12893988	0.96[AMR][1000 genomes];0.81[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs17476399	0.91[AMR][1000 genomes];0.81[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs17567627	0.92[AMR][1000 genomes];0.81[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs1953800	0.83[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs2877661	0.96[AMR][1000 genomes];0.81[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs34273029	0.90[AMR][1000 genomes];0.81[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs34866539	0.85[AMR][1000 genomes]
rs3751524	0.80[AMR][1000 genomes]
rs3764183	0.91[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs7493545	0.86[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs8019852	0.85[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv976352	chr14:70924060-70926861	Weak transcription Enhancers	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:70910600-70955600	Weak transcription	Left Ventricle	heart
2	chr14:70917000-70940200	Weak transcription	Aorta	Aorta
3	chr14:70921800-70940000	Weak transcription	Psoas Muscle	Psoas
4	chr14:70922000-70927200	Weak transcription	HSMMtube	muscle
5	chr14:70925800-70928800	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
6	chr14:70925800-70929000	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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