The 2.0 version of rSNPBase

Variant report

Variant rs2028432
Chromosome Location chr2:191283478-191283479
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:75 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:191273800-191301400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr2:191274200-191291600 Weak transcription Fetal Stomach stomach
3 chr2:191274400-191285000 Weak transcription Colon Smooth Muscle Colon
4 chr2:191274600-191291400 Weak transcription Fetal Intestine Large intestine
5 chr2:191274800-191283800 Weak transcription Duodenum Smooth Muscle Duodenum
6 chr2:191274800-191285000 Weak transcription Rectal Smooth Muscle rectum
7 chr2:191274800-191286000 Enhancers Primary T killer naive cells fromperipheralblood blood
8 chr2:191274800-191300800 Weak transcription Stomach Smooth Muscle stomach
9 chr2:191277400-191291400 Weak transcription Fetal Intestine Small intestine
10 chr2:191278400-191291200 Weak transcription Fetal Brain Female brain
11 chr2:191278400-191291600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
12 chr2:191278600-191301200 Weak transcription Pancreas Pancrea
13 chr2:191278800-191285200 Enhancers Breast Myoepithelial Primary Cells Breast
14 chr2:191278800-191290000 Weak transcription K562 blood
15 chr2:191278800-191300800 Weak transcription Fetal Thymus thymus
16 chr2:191278800-191301200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
17 chr2:191279000-191296800 Weak transcription Duodenum Mucosa Duodenum
18 chr2:191279000-191300800 Weak transcription Esophagus oesophagus
19 chr2:191279200-191303000 Weak transcription NHEK skin
20 chr2:191279400-191283600 Weak transcription HMEC breast
21 chr2:191279400-191296400 Weak transcription Rectal Mucosa Donor 31 rectum
22 chr2:191279800-191284200 Enhancers Primary T helper cells fromperipheralblood blood
23 chr2:191279800-191285400 Enhancers Primary T killer memory cells from peripheral blood blood
24 chr2:191279800-191285600 Weak transcription Pancreatic Islets Pancreatic Islet
25 chr2:191280400-191284600 Enhancers Brain Substantia Nigra brain
26 chr2:191280400-191291400 Weak transcription Thymus Thymus
27 chr2:191280400-191296400 Weak transcription Spleen Spleen
28 chr2:191280800-191296400 Weak transcription Rectal Mucosa Donor 29 rectum
29 chr2:191281000-191283600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
30 chr2:191281000-191284200 Enhancers Primary T helper naive cells fromperipheralblood blood
31 chr2:191281400-191291600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
32 chr2:191281400-191292800 Weak transcription Dnd41 blood
33 chr2:191281400-191296800 Weak transcription Sigmoid Colon Sigmoid Colon
34 chr2:191281400-191298600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
35 chr2:191281600-191283600 Weak transcription Primary B cells from cord blood blood
36 chr2:191281600-191290000 Weak transcription Primary hematopoietic stem cells short term culture blood
37 chr2:191281800-191283600 Enhancers Left Ventricle heart
38 chr2:191281800-191283800 Enhancers Brain Hippocampus Middle brain
39 chr2:191281800-191284000 Weak transcription Primary hematopoietic stem cells blood
40 chr2:191281800-191284200 Enhancers Brain Angular Gyrus brain
41 chr2:191281800-191296800 Weak transcription Small Intestine intestine
42 chr2:191282000-191284200 Genic enhancers Primary T cells fromperipheralblood blood
43 chr2:191282200-191283600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
44 chr2:191282200-191289400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
45 chr2:191282200-191296800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
46 chr2:191282400-191284800 Strong transcription Primary Natural Killer cells fromperipheralblood blood
47 chr2:191282400-191285000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
48 chr2:191282400-191297000 Weak transcription Ovary ovary
49 chr2:191282600-191283800 Weak transcription Right Atrium heart
50 chr2:191282600-191285200 Weak transcription GM12878-XiMat blood

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Last update: Aug 31, 2015