The 2.0 version of rSNPBase

Variant report

Variant rs2028433
Chromosome Location chr2:191281994-191281995
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:73 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:191273800-191301400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr2:191274200-191282000 Weak transcription Right Ventricle heart
3 chr2:191274200-191291600 Weak transcription Fetal Stomach stomach
4 chr2:191274400-191285000 Weak transcription Colon Smooth Muscle Colon
5 chr2:191274600-191282400 Enhancers Primary T helper memory cells from peripheral blood 1 blood
6 chr2:191274600-191291400 Weak transcription Fetal Intestine Large intestine
7 chr2:191274800-191283800 Weak transcription Duodenum Smooth Muscle Duodenum
8 chr2:191274800-191285000 Weak transcription Rectal Smooth Muscle rectum
9 chr2:191274800-191286000 Enhancers Primary T killer naive cells fromperipheralblood blood
10 chr2:191274800-191300800 Weak transcription Stomach Smooth Muscle stomach
11 chr2:191275000-191282000 Weak transcription Right Atrium heart
12 chr2:191275200-191282000 Weak transcription Fetal Brain Male brain
13 chr2:191277400-191291400 Weak transcription Fetal Intestine Small intestine
14 chr2:191278400-191291200 Weak transcription Fetal Brain Female brain
15 chr2:191278400-191291600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
16 chr2:191278600-191283200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
17 chr2:191278600-191283400 Weak transcription Stomach Mucosa stomach
18 chr2:191278600-191301200 Weak transcription Pancreas Pancrea
19 chr2:191278800-191282000 Weak transcription Ovary ovary
20 chr2:191278800-191285200 Enhancers Breast Myoepithelial Primary Cells Breast
21 chr2:191278800-191290000 Weak transcription K562 blood
22 chr2:191278800-191300800 Weak transcription Fetal Thymus thymus
23 chr2:191278800-191301200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
24 chr2:191279000-191282000 Weak transcription Gastric stomach
25 chr2:191279000-191282000 Weak transcription Lung lung
26 chr2:191279000-191296800 Weak transcription Duodenum Mucosa Duodenum
27 chr2:191279000-191300800 Weak transcription Esophagus oesophagus
28 chr2:191279200-191303000 Weak transcription NHEK skin
29 chr2:191279400-191283600 Weak transcription HMEC breast
30 chr2:191279400-191296400 Weak transcription Rectal Mucosa Donor 31 rectum
31 chr2:191279800-191284200 Enhancers Primary T helper cells fromperipheralblood blood
32 chr2:191279800-191285400 Enhancers Primary T killer memory cells from peripheral blood blood
33 chr2:191279800-191285600 Weak transcription Pancreatic Islets Pancreatic Islet
34 chr2:191280000-191282200 Enhancers Primary T helper 17 cells PMA-I stimulated --
35 chr2:191280200-191283000 Enhancers Brain Anterior Caudate brain
36 chr2:191280200-191283200 Enhancers Primary T helper memory cells from peripheral blood 2 blood
37 chr2:191280400-191283400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
38 chr2:191280400-191284600 Enhancers Brain Substantia Nigra brain
39 chr2:191280400-191291400 Weak transcription Thymus Thymus
40 chr2:191280400-191296400 Weak transcription Spleen Spleen
41 chr2:191280600-191282600 Enhancers Adipose Nuclei Adipose
42 chr2:191280800-191296400 Weak transcription Rectal Mucosa Donor 29 rectum
43 chr2:191281000-191282200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
44 chr2:191281000-191283600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
45 chr2:191281000-191284200 Enhancers Primary T helper naive cells fromperipheralblood blood
46 chr2:191281200-191282600 Enhancers Fetal Adrenal Gland Adrenal Gland
47 chr2:191281200-191282600 Enhancers Fetal Muscle Leg muscle
48 chr2:191281200-191282800 Enhancers Primary T helper cells PMA-I stimulated --
49 chr2:191281200-191283000 Enhancers Primary T regulatory cells fromperipheralblood blood
50 chr2:191281200-191283000 Enhancers Brain Inferior Temporal Lobe brain

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Last update: Aug 31, 2015