Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr3:141349712..141351390-chr3:141359756..141361373,2	MCF-7	breast:

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs1011330	0.81[AMR][1000 genomes];0.88[ASN][1000 genomes]
rs11711597	0.82[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs12632759	0.94[AMR][1000 genomes];0.88[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs13088397	0.87[AMR][1000 genomes];0.83[ASN][1000 genomes]
rs2030186	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2640001	0.83[AMR][1000 genomes];0.80[ASN][1000 genomes]
rs2640019	0.85[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs295294	0.83[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs295296	0.81[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs295314	0.87[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs295315	0.87[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs295317	0.86[AMR][1000 genomes];0.83[ASN][1000 genomes]
rs34319548	0.89[AFR][1000 genomes];0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs34867571	0.87[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs4634089	0.86[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs4683615	0.94[AMR][1000 genomes];0.88[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs7650428	0.82[ASN][1000 genomes]
rs7653258	0.80[ASN][1000 genomes]
rs868767	0.82[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs868768	0.82[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs9812758	0.83[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv949709	chr3:141295050-142178144	Weak transcription Strong transcription Flanking Active TSS Enhancers Genic enhancers Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	61 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:141350000-141351800	Weak transcription	Fetal Intestine Large	intestine
2	chr3:141350200-141352200	Weak transcription	Fetal Intestine Small	intestine

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