Variant report

Variant	rs2033465
Chromosome Location	chr5:150966327-150966328
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr5:150965412..150967281-chr5:150969711..150971989,2	K562	blood:

Extended variants
information (count: 6 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:6)

rs_ID	r²[population]
rs1549918	0.84[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs2288777	0.89[CEU][hapmap];1.00[TSI][hapmap];0.81[EUR][1000 genomes]
rs3734062	0.89[CEU][hapmap];0.89[CHB][hapmap];0.93[CHD][hapmap];0.81[JPT][hapmap];0.85[MEX][hapmap];1.00[TSI][hapmap];0.84[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs60907456	0.89[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs61351310	0.86[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs998076	0.89[CEU][hapmap];1.00[TSI][hapmap]

No data

Chromatin state (count:22 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:150959600-150967400	Enhancers	Breast Myoepithelial Primary Cells	Breast
2	chr5:150961800-150968600	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
3	chr5:150961800-150970400	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
4	chr5:150962600-150968000	Genic enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
5	chr5:150964400-150975000	Weak transcription	HSMMtube	muscle
6	chr5:150964800-150966600	Enhancers	Fetal Muscle Leg	muscle
7	chr5:150965400-150966400	Enhancers	Skeletal Muscle Male	skeletal muscle
8	chr5:150965400-150966400	Transcr. at gene 5' and 3'	NHEK	skin
9	chr5:150965600-150966600	Enhancers	Fetal Muscle Trunk	muscle
10	chr5:150965800-150967600	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
11	chr5:150965800-150968800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
12	chr5:150966000-150967400	Weak transcription	Esophagus	oesophagus
13	chr5:150966000-150969200	Weak transcription	H1 Cell Line	embryonic stem cell
14	chr5:150966000-150969600	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
15	chr5:150966000-150969600	Weak transcription	HSMM	muscle
16	chr5:150966000-151002000	Weak transcription	Right Atrium	heart
17	chr5:150966200-150967000	Genic enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
18	chr5:150966200-150967000	Enhancers	HMEC	breast
19	chr5:150966200-150967800	Genic enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
20	chr5:150966200-150968800	Weak transcription	Adipose Nuclei	Adipose
21	chr5:150966200-150969800	Weak transcription	Skeletal Muscle Female	skeletal muscle
22	chr5:150966200-150972400	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin

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