The 2.0 version of rSNPBase

Variant report

Variant rs2048420
Chromosome Location chr8:8667603-8667604
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:95 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr8:8637600-8679800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
2 chr8:8653800-8674800 Weak transcription Brain Germinal Matrix brain
3 chr8:8654000-8671000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
4 chr8:8655200-8680600 Weak transcription Colonic Mucosa Colon
5 chr8:8655600-8673400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
6 chr8:8655600-8685600 Weak transcription Fetal Brain Female brain
7 chr8:8655800-8669000 Weak transcription Primary T helper naive cells fromperipheralblood blood
8 chr8:8655800-8669200 Weak transcription Primary T helper naive cells from peripheral blood blood
9 chr8:8655800-8669200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
10 chr8:8655800-8669200 Weak transcription Thymus Thymus
11 chr8:8656000-8669600 Weak transcription Primary T regulatory cells fromperipheralblood blood
12 chr8:8656200-8669000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
13 chr8:8656200-8669000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
14 chr8:8658200-8668800 Weak transcription Primary T helper cells fromperipheralblood blood
15 chr8:8658200-8669000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
16 chr8:8658400-8669200 Weak transcription Fetal Intestine Large intestine
17 chr8:8658400-8675200 Weak transcription Rectal Mucosa Donor 29 rectum
18 chr8:8658400-8687200 Weak transcription Skeletal Muscle Male skeletal muscle
19 chr8:8659400-8671600 Weak transcription Fetal Muscle Trunk muscle
20 chr8:8660200-8684400 Weak transcription HSMMtube muscle
21 chr8:8660600-8669000 Weak transcription Dnd41 blood
22 chr8:8662200-8668200 Weak transcription Primary T cells from cord blood blood
23 chr8:8662400-8668400 Weak transcription Fetal Intestine Small intestine
24 chr8:8662600-8683400 Weak transcription Rectal Mucosa Donor 31 rectum
25 chr8:8662800-8679800 Weak transcription Brain Angular Gyrus brain
26 chr8:8663400-8691800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
27 chr8:8663600-8668000 Enhancers Fetal Heart heart
28 chr8:8663600-8681400 Weak transcription Cortex derived primary cultured neurospheres brain
29 chr8:8663800-8669000 Weak transcription Duodenum Mucosa Duodenum
30 chr8:8664000-8669200 Weak transcription Primary monocytes fromperipheralblood blood
31 chr8:8664000-8669200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
32 chr8:8664000-8669200 Weak transcription Primary T helper cells PMA-I stimulated --
33 chr8:8664000-8673600 Weak transcription Stomach Mucosa stomach
34 chr8:8664000-8678600 Weak transcription Spleen Spleen
35 chr8:8664000-8682400 Weak transcription ES-I3 Cell Line embryonic stem cell
36 chr8:8664200-8668000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
37 chr8:8664200-8669200 Weak transcription Monocytes-CD14+_RO01746 blood
38 chr8:8664200-8675000 Weak transcription Hela-S3 cervix
39 chr8:8664200-8681200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
40 chr8:8664200-8691400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
41 chr8:8664400-8668200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
42 chr8:8664400-8668400 Weak transcription Primary T cells fromperipheralblood blood
43 chr8:8664400-8675200 Weak transcription Pancreas Pancrea
44 chr8:8664400-8691800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
45 chr8:8664600-8683200 Weak transcription Muscle Satellite Cultured Cells --
46 chr8:8665000-8669200 Weak transcription Primary hematopoietic stem cells blood
47 chr8:8665000-8670000 Enhancers Fetal Lung lung
48 chr8:8665200-8668400 Weak transcription Primary hematopoietic stem cells short term culture blood
49 chr8:8665200-8669000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
50 chr8:8665200-8669400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain

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Last update: Aug 31, 2015