Variant report

Variant	rs2050321
Chromosome Location	chr10:99394950-99394951
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:99393395..99395875-chr10:99398874..99401519,2	K562	blood:
2	chr10:99078864..99080606-chr10:99393541..99395713,2	MCF-7	breast:

Variant related genes	Relation type
ENSG00000165879	Chromatin interaction
ENSG00000155252	Chromatin interaction

Extended variants
information (count: 2 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:1)

rs_ID	r²[population]
rs4919121	1.00[LWK][hapmap];0.85[YRI][hapmap];0.83[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv1817777	chr10:99196035-99558169	Weak transcription Flanking Active TSS Active TSS Enhancers Genic enhancers Strong transcription Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	66 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:37 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:99393600-99400000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr10:99393600-99400200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
3	chr10:99393800-99396400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
4	chr10:99393800-99396600	Weak transcription	Primary hematopoietic stem cells	blood
5	chr10:99393800-99398200	Weak transcription	HUES48 Cell Line	embryonic stem cell
6	chr10:99393800-99398800	Weak transcription	Fetal Kidney	kidney
7	chr10:99393800-99399600	Weak transcription	ES-I3 Cell Line	embryonic stem cell
8	chr10:99393800-99399600	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
9	chr10:99393800-99399600	Weak transcription	HUES64 Cell Line	embryonic stem cell
10	chr10:99393800-99399600	Weak transcription	iPS-18 Cell Line	embryonic stem cell
11	chr10:99393800-99399600	Weak transcription	iPS-20b Cell Line	embryonic stem cell
12	chr10:99393800-99399600	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
13	chr10:99393800-99399600	Weak transcription	Monocytes-CD14+_RO01746	blood
14	chr10:99393800-99399800	Weak transcription	Primary T helper cells PMA-I stimulated	--
15	chr10:99393800-99399800	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
16	chr10:99393800-99399800	Weak transcription	NHDF-Ad	bronchial
17	chr10:99393800-99399800	Weak transcription	Osteobl	bone
18	chr10:99393800-99400000	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
19	chr10:99393800-99400000	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
20	chr10:99393800-99400000	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
21	chr10:99393800-99400200	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
22	chr10:99394000-99398400	Weak transcription	A549	lung
23	chr10:99394000-99399600	Weak transcription	iPS-15b Cell Line	embryonic stem cell
24	chr10:99394000-99399600	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
25	chr10:99394000-99399800	Weak transcription	Primary T helper cells fromperipheralblood	blood
26	chr10:99394000-99399800	Weak transcription	Brain Anterior Caudate	brain
27	chr10:99394000-99399800	Weak transcription	Brain Inferior Temporal Lobe	brain
28	chr10:99394000-99400000	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
29	chr10:99394000-99400000	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
30	chr10:99394000-99400000	Weak transcription	Fetal Muscle Leg	muscle
31	chr10:99394000-99400000	Weak transcription	Pancreas	Pancrea
32	chr10:99394000-99400000	Weak transcription	Rectal Mucosa Donor 31	rectum
33	chr10:99394000-99400000	Weak transcription	Skeletal Muscle Male	skeletal muscle
34	chr10:99394000-99400000	Weak transcription	Skeletal Muscle Female	skeletal muscle
35	chr10:99394400-99399600	Weak transcription	HepG2	liver
36	chr10:99394400-99399600	Weak transcription	K562	blood
37	chr10:99394600-99396800	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell

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