Variant report

Variant	rs4919121
Chromosome Location	chr10:99376843-99376844
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:2)

rs_ID	r²[population]
rs2050321	1.00[LWK][hapmap];0.85[YRI][hapmap];0.83[AFR][1000 genomes]
rs4547032	1.00[MEX][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv1817777	chr10:99196035-99558169	Weak transcription Flanking Active TSS Active TSS Enhancers Genic enhancers Strong transcription Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	66 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:67 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:99361800-99392200	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
2	chr10:99368000-99392200	Weak transcription	Osteobl	bone
3	chr10:99369600-99377600	Weak transcription	Aorta	Aorta
4	chr10:99369800-99378000	Weak transcription	Primary T cells from cord blood	blood
5	chr10:99371000-99392200	Weak transcription	Fetal Lung	lung
6	chr10:99371400-99378600	Weak transcription	Spleen	Spleen
7	chr10:99371600-99377600	Weak transcription	H9 Cell Line	embryonic stem cell
8	chr10:99371600-99378000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
9	chr10:99371600-99378400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
10	chr10:99371600-99380200	Weak transcription	iPS-18 Cell Line	embryonic stem cell
11	chr10:99371600-99380400	Weak transcription	Right Ventricle	heart
12	chr10:99371600-99381000	Weak transcription	HUES64 Cell Line	embryonic stem cell
13	chr10:99371600-99392200	Weak transcription	HUES48 Cell Line	embryonic stem cell
14	chr10:99371600-99392600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
15	chr10:99371800-99381000	Weak transcription	K562	blood
16	chr10:99371800-99392200	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
17	chr10:99372200-99379000	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
18	chr10:99372200-99380200	Weak transcription	HSMMtube	muscle
19	chr10:99372200-99390600	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
20	chr10:99372200-99392400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
21	chr10:99372400-99378200	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
22	chr10:99372400-99381600	Weak transcription	Colon Smooth Muscle	Colon
23	chr10:99372400-99382800	Weak transcription	Liver	Liver
24	chr10:99372400-99391200	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
25	chr10:99372400-99392200	Weak transcription	NHEK	skin
26	chr10:99372400-99392400	Weak transcription	ES-I3 Cell Line	embryonic stem cell
27	chr10:99372400-99392400	Weak transcription	HUES6 Cell Line	embryonic stem cell
28	chr10:99372400-99392400	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
29	chr10:99372600-99380600	Weak transcription	iPS-20b Cell Line	embryonic stem cell
30	chr10:99372600-99382200	Weak transcription	Fetal Brain Male	brain
31	chr10:99372800-99378000	Weak transcription	Fetal Heart	heart
32	chr10:99373200-99378400	Strong transcription	Fetal Stomach	stomach
33	chr10:99373600-99378800	Strong transcription	Fetal Brain Female	brain
34	chr10:99373600-99379600	Strong transcription	Breast Myoepithelial Primary Cells	Breast
35	chr10:99373800-99377400	Strong transcription	Brain Germinal Matrix	brain
36	chr10:99373800-99378800	Strong transcription	Brain Inferior Temporal Lobe	brain
37	chr10:99374200-99379600	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
38	chr10:99374200-99392400	Weak transcription	Primary hematopoietic stem cells	blood
39	chr10:99374400-99377600	Strong transcription	Brain Anterior Caudate	brain
40	chr10:99374600-99392200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
41	chr10:99375000-99378600	Strong transcription	Cortex derived primary cultured neurospheres	brain
42	chr10:99375000-99380800	Weak transcription	NHDF-Ad	bronchial
43	chr10:99375200-99392200	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
44	chr10:99375400-99377200	Strong transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
45	chr10:99375400-99377200	Strong transcription	Stomach Smooth Muscle	stomach
46	chr10:99375600-99377000	Strong transcription	ES-UCSF4 Cell Line	embryonic stem cell
47	chr10:99375600-99377000	Strong transcription	Brain Substantia Nigra	brain
48	chr10:99375600-99377200	Strong transcription	Ganglion Eminence derived primary cultured neurospheres	brain
49	chr10:99375600-99377400	Strong transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
50	chr10:99375800-99377000	Strong transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived

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