The 2.0 version of rSNPBase

Variant report

Variant rs2051858
Chromosome Location chr22:30300411-30300412
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:70 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr22:30280200-30303800 Weak transcription Aorta Aorta
2 chr22:30280800-30303600 Weak transcription Rectal Mucosa Donor 31 rectum
3 chr22:30281000-30303000 Weak transcription Fetal Muscle Trunk muscle
4 chr22:30281000-30303200 Weak transcription Fetal Muscle Leg muscle
5 chr22:30281400-30312200 Weak transcription Primary B cells from peripheral blood blood
6 chr22:30281600-30303400 Weak transcription Fetal Intestine Small intestine
7 chr22:30282200-30303000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
8 chr22:30282200-30303200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
9 chr22:30282200-30310200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
10 chr22:30282600-30303400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
11 chr22:30283800-30307000 Weak transcription Esophagus oesophagus
12 chr22:30284000-30303600 Weak transcription Brain Angular Gyrus brain
13 chr22:30284400-30303800 Weak transcription Pancreas Pancrea
14 chr22:30287000-30301000 Weak transcription Primary T killer memory cells from peripheral blood blood
15 chr22:30287000-30319600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
16 chr22:30290400-30312000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
17 chr22:30291000-30303600 Weak transcription Colon Smooth Muscle Colon
18 chr22:30294800-30301000 Weak transcription Primary T helper cells fromperipheralblood blood
19 chr22:30294800-30302000 Weak transcription Right Ventricle heart
20 chr22:30294800-30303400 Weak transcription Rectal Smooth Muscle rectum
21 chr22:30294800-30303800 Weak transcription Fetal Stomach stomach
22 chr22:30295400-30303400 Weak transcription Sigmoid Colon Sigmoid Colon
23 chr22:30295800-30303200 Weak transcription Primary hematopoietic stem cells short term culture blood
24 chr22:30296000-30303800 Weak transcription Primary T helper naive cells from peripheral blood blood
25 chr22:30296600-30305600 Enhancers Primary monocytes fromperipheralblood blood
26 chr22:30297000-30303800 Weak transcription Fetal Intestine Large intestine
27 chr22:30297800-30302800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
28 chr22:30297800-30303000 Weak transcription Muscle Satellite Cultured Cells --
29 chr22:30297800-30303000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
30 chr22:30297800-30303400 Weak transcription Adipose Nuclei Adipose
31 chr22:30298000-30302000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
32 chr22:30298000-30302000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
33 chr22:30298000-30303400 Weak transcription Brain Substantia Nigra brain
34 chr22:30298000-30303400 Weak transcription Fetal Lung lung
35 chr22:30298000-30303600 Enhancers Monocytes-CD14+_RO01746 blood
36 chr22:30298000-30303600 Weak transcription NHLF lung
37 chr22:30298000-30314600 Enhancers Primary neutrophils fromperipheralblood blood
38 chr22:30298200-30303400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
39 chr22:30298200-30304000 Weak transcription Primary hematopoietic stem cells blood
40 chr22:30298800-30303800 Weak transcription Primary B cells from cord blood blood
41 chr22:30299000-30300800 Enhancers Breast Myoepithelial Primary Cells Breast
42 chr22:30299000-30303000 Weak transcription Osteobl bone
43 chr22:30299000-30303400 Weak transcription Duodenum Smooth Muscle Duodenum
44 chr22:30299000-30303600 Weak transcription Brain Germinal Matrix brain
45 chr22:30299400-30300800 Enhancers Primary T helper naive cells fromperipheralblood blood
46 chr22:30299400-30301400 Enhancers Left Ventricle heart
47 chr22:30299600-30302000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
48 chr22:30299800-30300600 Enhancers Brain Anterior Caudate brain
49 chr22:30299800-30300600 Enhancers Duodenum Mucosa Duodenum
50 chr22:30299800-30300800 Enhancers Cortex derived primary cultured neurospheres brain

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Last update: Aug 31, 2015