The 2.0 version of rSNPBase

Variant report

Variant rs73394897
Chromosome Location chr22:30284550-30284551
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:70 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr22:30280000-30286200 Weak transcription Gastric stomach
2 chr22:30280200-30293600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
3 chr22:30280200-30303800 Weak transcription Aorta Aorta
4 chr22:30280400-30297400 Weak transcription K562 blood
5 chr22:30280800-30291600 Weak transcription Lung lung
6 chr22:30280800-30303600 Weak transcription Rectal Mucosa Donor 31 rectum
7 chr22:30281000-30287600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
8 chr22:30281000-30303000 Weak transcription Fetal Muscle Trunk muscle
9 chr22:30281000-30303200 Weak transcription Fetal Muscle Leg muscle
10 chr22:30281400-30312200 Weak transcription Primary B cells from peripheral blood blood
11 chr22:30281600-30303400 Weak transcription Fetal Intestine Small intestine
12 chr22:30281800-30286200 Weak transcription Primary T cells fromperipheralblood blood
13 chr22:30281800-30299000 Weak transcription Spleen Spleen
14 chr22:30281800-30300200 Weak transcription H9 Cell Line embryonic stem cell
15 chr22:30282000-30297600 Weak transcription Duodenum Smooth Muscle Duodenum
16 chr22:30282200-30284800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
17 chr22:30282200-30286800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
18 chr22:30282200-30287600 Weak transcription Right Atrium heart
19 chr22:30282200-30290400 Weak transcription Fetal Stomach stomach
20 chr22:30282200-30303000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
21 chr22:30282200-30303200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
22 chr22:30282200-30310200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
23 chr22:30282600-30284600 Enhancers Fetal Brain Female brain
24 chr22:30282600-30290200 Weak transcription Fetal Brain Male brain
25 chr22:30282600-30300000 Weak transcription Small Intestine intestine
26 chr22:30282600-30303400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
27 chr22:30283000-30284600 Enhancers Primary T helper cells PMA-I stimulated --
28 chr22:30283200-30284600 Enhancers Brain Substantia Nigra brain
29 chr22:30283200-30284600 Enhancers Rectal Smooth Muscle rectum
30 chr22:30283400-30286800 Enhancers Primary monocytes fromperipheralblood blood
31 chr22:30283600-30284600 Enhancers Primary mononuclear cells fromperipheralblood Blood
32 chr22:30283600-30285800 Weak transcription Duodenum Mucosa Duodenum
33 chr22:30283600-30286400 Weak transcription Right Ventricle heart
34 chr22:30283600-30287600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
35 chr22:30283600-30287800 Weak transcription Primary hematopoietic stem cells blood
36 chr22:30283800-30284800 Enhancers Monocytes-CD14+_RO01746 blood
37 chr22:30283800-30286200 Weak transcription Sigmoid Colon Sigmoid Colon
38 chr22:30283800-30286400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
39 chr22:30283800-30286400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
40 chr22:30283800-30286400 Weak transcription HepG2 liver
41 chr22:30283800-30286600 Weak transcription Adipose Nuclei Adipose
42 chr22:30283800-30287800 Weak transcription Primary T killer naive cells fromperipheralblood blood
43 chr22:30283800-30287800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
44 chr22:30283800-30289600 Weak transcription Breast Myoepithelial Primary Cells Breast
45 chr22:30283800-30290000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
46 chr22:30283800-30290200 Weak transcription Fetal Heart heart
47 chr22:30283800-30292600 Enhancers Primary neutrophils fromperipheralblood blood
48 chr22:30283800-30294200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
49 chr22:30283800-30294400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
50 chr22:30283800-30295600 Weak transcription Primary T helper naive cells from peripheral blood blood

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Last update: Aug 31, 2015