Variant report

Variant	rs2056109
Chromosome Location	chr2:180538442-180538443
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 5 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:5)

rs_ID	r²[population]
rs2222033	1.00[CEU][hapmap];0.88[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs7421166	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs7424112	0.89[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs872161	0.84[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs932116	1.00[CEU][hapmap];0.96[AMR][1000 genomes];0.97[EUR][1000 genomes]

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:180535200-180540200	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr2:180536200-180541600	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
3	chr2:180536800-180539400	Weak transcription	Gastric	stomach
4	chr2:180536800-180541200	Weak transcription	HSMMtube	muscle
5	chr2:180537400-180542400	Weak transcription	Fetal Intestine Large	intestine

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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