The 2.0 version of rSNPBase
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Variant report
Variant
rs2064006
Chromosome Location
chr21:16160351-16160352
allele
A/G
Outlinks
Ensembl
 
UCSC
Chromatin state
Related regulatory elements
Target genes
Other information
TF binding region (count:0)
CpG islands (count:0)
Chromatin interactive region (count:3)
LncRNA region (count:0)
Mature miRNA region (count: 0)
miRNA target sites (count:0)
No data
No data
(count:3 , 50 per page) page:
1
No.
Distal block
Cell Line
Cell type
Cell Stage
1
chr21:16143951..16146224-chr21:16159304..16162772,3
K562
blood:
2
chr21:16160216..16161938-chr21:16211062..16213501,2
K562
blood:
3
chr21:16158777..16161281-chr21:16167940..16169709,2
K562
blood:
No data
No data
No data
No data
Extended variants information (count: 8 )
Associated traits (count: 0)
rSNPs within LD-proxies of this variant (count:8)
rs_ID
r
2
[population]
rs17004313
0.93[EUR][1000 genomes]
rs2103467
0.90[YRI][hapmap]
rs2822918
0.89[LWK][hapmap]
rs2822927
0.82[YRI][hapmap]
rs2822958
0.90[EUR][1000 genomes]
rs57150396
0.85[EUR][1000 genomes]
rs59794977
0.81[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs9977885
0.84[ASW][hapmap]
No data
Chromatin state (count:0 , 50 per page) page:
No data
Quick Search:
Input of quick search could be:
dbSNP/dbVar ID:
rs12345
/
nsv7879
a single nucleotide as 0-based coordinates:
chr1:12345
chromosomal regions:
chr1:12345-34567
what's new
New variant types
New dimension of annotation
New regulatory manner
More detailed annotation on variant overlapped TFBS
More extended data
New search manner
Quick links