Variant report

Variant	rs9977885
Chromosome Location	chr21:16208619-16208620
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 14 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:13)

rs_ID	r²[population]
rs1997579	0.86[GIH][hapmap]
rs2064006	0.84[ASW][hapmap]
rs2403837	0.86[CEU][hapmap];1.00[GIH][hapmap];0.96[TSI][hapmap]
rs2822933	0.86[CEU][hapmap]
rs2822940	0.86[CEU][hapmap];0.83[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs2822946	0.86[CEU][hapmap];0.86[GIH][hapmap]
rs2822952	0.86[CEU][hapmap]
rs7276875	0.86[CEU][hapmap]
rs7280544	0.86[CEU][hapmap]
rs8128685	0.86[CEU][hapmap];1.00[GIH][hapmap];1.00[MEX][hapmap];0.93[TSI][hapmap]
rs8131603	0.86[CEU][hapmap];1.00[GIH][hapmap];0.91[MEX][hapmap];0.96[TSI][hapmap]
rs9981655	0.86[GIH][hapmap]
rs9984950	0.86[CEU][hapmap];0.95[GIH][hapmap];0.93[TSI][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv869911	chr21:16184645-16210579	Enhancers Weak transcription Flanking Active TSS	TF binding region Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:0 , 50 per page) page:

No data

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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