Variant report

Variant	rs2822952
Chromosome Location	chr21:16195134-16195135
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 14 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:13)

rs_ID	r²[population]
rs1120220	0.93[CEU][hapmap]
rs1569337	0.93[CEU][hapmap];0.91[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs1997579	0.92[CEU][hapmap]
rs2250987	0.93[CEU][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2776032	0.93[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs2822938	0.93[CEU][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2822946	1.00[CEU][hapmap];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs2822947	0.93[CEU][hapmap];1.00[YRI][hapmap];0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs4817413	0.92[CEU][hapmap];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs4817421	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs7276875	0.81[CEU][hapmap]
rs9977885	0.86[CEU][hapmap]
rs9981655	0.92[CEU][hapmap];1.00[YRI][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv869911	chr21:16184645-16210579	Enhancers Weak transcription Flanking Active TSS	TF binding region Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:0 , 50 per page) page:

No data

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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