Variant report

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs1120220	1.00[CEU][hapmap]
rs12481742	0.85[CEU][hapmap]
rs1882875	0.86[CEU][hapmap]
rs1997578	0.85[CEU][hapmap]
rs1997579	1.00[CEU][hapmap]
rs2250987	1.00[CEU][hapmap];0.91[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs2776032	0.85[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs2822932	0.86[CEU][hapmap]
rs2822933	0.81[CEU][hapmap]
rs2822938	1.00[CEU][hapmap];0.91[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs2822940	0.81[CEU][hapmap]
rs2822946	0.92[CEU][hapmap];0.91[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs2822947	1.00[CEU][hapmap];0.91[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs2822952	0.93[CEU][hapmap];0.91[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs4817413	1.00[CEU][hapmap];0.91[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs4817421	0.85[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs7276875	0.87[CEU][hapmap]
rs7280544	0.81[CEU][hapmap]
rs9305456	0.86[CEU][hapmap]
rs9981655	1.00[CEU][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv869911	chr21:16184645-16210579	Enhancers Weak transcription Flanking Active TSS	TF binding region Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr21:16189600-16190200	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
2	chr21:16189600-16190600	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell

Quick Search: