Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:133001447..133003694-chr6:133009562..133012347,2	K562	blood:

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs1024178	0.81[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.91[JPT][hapmap];1.00[MEX][hapmap];0.91[ASN][1000 genomes]
rs11962296	0.91[ASN][1000 genomes]
rs11965817	0.81[CEU][hapmap];1.00[CHB][hapmap];0.91[JPT][hapmap];0.88[ASN][1000 genomes]
rs1569652	0.91[ASN][1000 genomes]
rs1569653	0.95[CHB][hapmap];0.83[JPT][hapmap];0.85[ASN][1000 genomes]
rs1569654	0.81[CEU][hapmap];1.00[CHB][hapmap];0.91[JPT][hapmap];0.91[ASN][1000 genomes]
rs17061571	0.90[ASN][1000 genomes]
rs2064312	0.91[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2267950	0.85[CHB][hapmap];0.89[CHD][hapmap];0.83[JPT][hapmap];0.87[ASN][1000 genomes]
rs2272996	0.80[CHD][hapmap]
rs2840827	0.82[JPT][hapmap]
rs3798793	0.82[JPT][hapmap]
rs3798800	0.85[CHB][hapmap];0.90[CHD][hapmap];0.83[JPT][hapmap];0.86[ASN][1000 genomes]
rs3798801	0.84[CHB][hapmap];0.82[JPT][hapmap];0.86[ASN][1000 genomes]
rs62425072	0.88[ASN][1000 genomes]
rs62425075	0.87[ASN][1000 genomes]
rs742516	0.82[JPT][hapmap]
rs7747513	0.91[ASN][1000 genomes]
rs9373029	0.85[ASN][1000 genomes]
rs9389025	0.85[CHB][hapmap];0.83[JPT][hapmap];0.87[ASN][1000 genomes]
rs9389026	0.87[ASN][1000 genomes]
rs9399037	0.84[ASN][1000 genomes]
rs9399040	0.86[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv532069	chr6:132776411-133462292	Active TSS Strong transcription Weak transcription Enhancers Transcr. at gene 5' and 3' Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	90 gene(s)	inside rSNPs	diseases
2	nsv1015742	chr6:132933666-133285852	Active TSS Flanking Active TSS Enhancers Strong transcription Weak transcription Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	71 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:132993200-133002200	Weak transcription	Liver	Liver
2	chr6:132997400-133003000	Weak transcription	Duodenum Mucosa	Duodenum
3	chr6:132998200-133003000	Weak transcription	Primary neutrophils fromperipheralblood	blood
4	chr6:132998400-133003000	Weak transcription	Monocytes-CD14+_RO01746	blood
5	chr6:132999600-133003200	Weak transcription	Primary monocytes fromperipheralblood	blood
6	chr6:133001000-133002400	Weak transcription	HSMMtube	muscle
7	chr6:133001000-133004600	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
8	chr6:133001200-133003400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
9	chr6:133001400-133004200	Weak transcription	HSMM	muscle
10	chr6:133001800-133004800	Weak transcription	Duodenum Smooth Muscle	Duodenum

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