Variant report

Variant rs206799
Chromosome Location chr2:31627106-31627107
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:29 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:31548000-31634600 Weak transcription Pancreatic Islets Pancreatic Islet
2 chr2:31565200-31633000 Weak transcription Rectal Mucosa Donor 29 rectum
3 chr2:31574600-31636600 Weak transcription Colonic Mucosa Colon
4 chr2:31598400-31639000 Weak transcription Sigmoid Colon Sigmoid Colon
5 chr2:31599600-31636600 Weak transcription Rectal Mucosa Donor 31 rectum
6 chr2:31620000-31627600 Strong transcription Duodenum Mucosa Duodenum
7 chr2:31620800-31627400 Strong transcription Liver Liver
8 chr2:31623400-31628000 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
9 chr2:31625400-31627600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
10 chr2:31625400-31627600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
11 chr2:31625400-31628400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
12 chr2:31625600-31627600 Enhancers A549 lung
13 chr2:31625600-31627800 Weak transcription Muscle Satellite Cultured Cells --
14 chr2:31625800-31627400 Genic enhancers NHEK skin
15 chr2:31626000-31627400 Weak transcription NH-A brain
16 chr2:31626200-31627200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
17 chr2:31626200-31628400 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
18 chr2:31626200-31630200 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
19 chr2:31626200-31634800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
20 chr2:31626400-31627400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
21 chr2:31626400-31633600 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
22 chr2:31626400-31634600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
23 chr2:31626600-31628600 Enhancers Fetal Adrenal Gland Adrenal Gland
24 chr2:31626800-31628800 Strong transcription HMEC breast
25 chr2:31627000-31627200 Enhancers NHLF lung
26 chr2:31627000-31627400 Enhancers NHDF-Ad bronchial
27 chr2:31627000-31627800 Enhancers Osteobl bone
28 chr2:31627000-31628800 Genic enhancers Fetal Intestine Large intestine
29 chr2:31627000-31629600 Genic enhancers Fetal Intestine Small intestine

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