Variant report

Variant rs207445
Chromosome Location chr2:31563885-31563886
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:20 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:31548000-31634600 Weak transcription Pancreatic Islets Pancreatic Islet
2 chr2:31557200-31579600 Strong transcription Liver Liver
3 chr2:31558200-31573200 Strong transcription Fetal Intestine Large intestine
4 chr2:31558800-31564600 Strong transcription Fetal Intestine Small intestine
5 chr2:31559600-31565600 Strong transcription Duodenum Mucosa Duodenum
6 chr2:31560400-31576800 Weak transcription Sigmoid Colon Sigmoid Colon
7 chr2:31560800-31570800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
8 chr2:31560800-31599800 Weak transcription Esophagus oesophagus
9 chr2:31561200-31569800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
10 chr2:31561400-31564200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
11 chr2:31561600-31570400 Weak transcription NHLF lung
12 chr2:31562000-31564000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
13 chr2:31562200-31564000 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
14 chr2:31562400-31564000 Strong transcription HMEC breast
15 chr2:31563600-31564400 Enhancers Breast Myoepithelial Primary Cells Breast
16 chr2:31563800-31564400 Genic enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
17 chr2:31563800-31565000 Genic enhancers NHEK skin
18 chr2:31563800-31565600 Strong transcription Placenta Placenta
19 chr2:31563800-31572800 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
20 chr2:31563800-31576600 Weak transcription Rectal Mucosa Donor 31 rectum

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