Variant report

Variant rs2077407
Chromosome Location chr19:41119829-41119830
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:123 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:41106000-41136800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr19:41109800-41122600 Weak transcription Aorta Aorta
3 chr19:41116400-41120000 Enhancers Stomach Mucosa stomach
4 chr19:41116600-41137000 Weak transcription Psoas Muscle Psoas
5 chr19:41117000-41121800 Weak transcription Hela-S3 cervix
6 chr19:41117000-41140200 Weak transcription Brain Angular Gyrus brain
7 chr19:41117200-41120400 Weak transcription Muscle Satellite Cultured Cells --
8 chr19:41117400-41125200 Weak transcription Brain Cingulate Gyrus brain
9 chr19:41118400-41120400 Bivalent/Poised TSS Rectal Smooth Muscle rectum
10 chr19:41118800-41120600 Transcr. at gene 5' and 3' Foreskin Fibroblast Primary Cells skin01 Skin
11 chr19:41118800-41121200 Active TSS H9 Cell Line embryonic stem cell
12 chr19:41118800-41121400 Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
13 chr19:41119000-41120000 Flanking Active TSS Monocytes-CD14+_RO01746 blood
14 chr19:41119000-41120400 Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
15 chr19:41119000-41120600 Active TSS Osteobl bone
16 chr19:41119000-41121000 Active TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
17 chr19:41119000-41121000 Active TSS ES-UCSF4 Cell Line embryonic stem cell
18 chr19:41119000-41121000 Flanking Active TSS Primary T helper naive cells fromperipheralblood blood
19 chr19:41119000-41121000 Flanking Bivalent TSS/Enh Fetal Adrenal Gland Adrenal Gland
20 chr19:41119000-41121200 Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
21 chr19:41119000-41121200 Active TSS HUES48 Cell Line embryonic stem cell
22 chr19:41119000-41121200 Active TSS iPS-15b Cell Line embryonic stem cell
23 chr19:41119000-41121200 Active TSS iPS-18 Cell Line embryonic stem cell
24 chr19:41119000-41121200 Flanking Active TSS Primary T cells fromperipheralblood blood
25 chr19:41119000-41121400 Active TSS HUES6 Cell Line embryonic stem cell
26 chr19:41119000-41121400 Active TSS HUES64 Cell Line embryonic stem cell
27 chr19:41119000-41121400 Active TSS iPS-20b Cell Line embryonic stem cell
28 chr19:41119000-41121400 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
29 chr19:41119000-41121400 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
30 chr19:41119200-41120200 Active TSS iPS DF 19.11 Cell Line embryonic stem cell
31 chr19:41119200-41120200 Active TSS Breast Myoepithelial Primary Cells Breast
32 chr19:41119200-41120200 Active TSS Primary T cells from cord blood blood
33 chr19:41119200-41120200 Active TSS Primary T helper memory cells from peripheral blood 2 blood
34 chr19:41119200-41120200 Active TSS Primary T helper memory cells from peripheral blood 1 blood
35 chr19:41119200-41120200 Bivalent/Poised TSS Brain Germinal Matrix brain
36 chr19:41119200-41120200 Bivalent/Poised TSS Duodenum Smooth Muscle Duodenum
37 chr19:41119200-41120200 Bivalent/Poised TSS Fetal Muscle Leg muscle
38 chr19:41119200-41120200 Active TSS A549 lung
39 chr19:41119200-41120200 Flanking Active TSS HMEC breast
40 chr19:41119200-41120200 Active TSS NHEK skin
41 chr19:41119200-41120400 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
42 chr19:41119200-41120400 Flanking Active TSS Pancreas Pancrea
43 chr19:41119200-41120600 Flanking Active TSS Esophagus oesophagus
44 chr19:41119200-41120600 Bivalent/Poised TSS Fetal Brain Female brain
45 chr19:41119200-41120600 Flanking Bivalent TSS/Enh Placenta Placenta
46 chr19:41119200-41120600 Flanking Bivalent TSS/Enh Stomach Smooth Muscle stomach
47 chr19:41119200-41120800 Flanking Active TSS Primary B cells from cord blood blood
48 chr19:41119200-41120800 Active TSS Brain Anterior Caudate brain
49 chr19:41119200-41120800 Flanking Bivalent TSS/Enh Fetal Intestine Small intestine
50 chr19:41119200-41120800 Flanking Bivalent TSS/Enh Fetal Stomach stomach

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