Variant report

Variant	rs2085694
Chromosome Location	chr1:161591979-161591980
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	POLR2A	chr1:161590935-161591981	H1-hESC	embryonic stem cell:	n/a	n/a
2	RCOR1	chr1:161591961-161592161	K562	blood:	n/a	n/a
3	SPI1	chr1:161591912-161592137	K562	blood:	n/a	chr1:161592057-161592070 chr1:161592056-161592069 chr1:161592032-161592039 chr1:161592058-161592067
4	MTA3	chr1:161591099-161592163	GM12878	blood:	n/a	n/a
5	POLR2A	chr1:161591136-161592258	K562	blood:	n/a	n/a
6	GABPA	chr1:161591948-161592185	K562	blood:	n/a	n/a
7	POLR2A	chr1:161591547-161592098	GM12878	blood:	n/a	n/a
8	EBF1	chr1:161591790-161592073	GM12878	blood:	n/a	n/a
9	MAFK	chr1:161590976-161592260	K562	blood:	n/a	chr1:161591072-161591081 chr1:161591070-161591086 chr1:161591075-161591086 chr1:161591074-161591085 chr1:161591070-161591085 chr1:161591112-161591128 chr1:161591108-161591125
10	RUNX3	chr1:161591141-161592315	GM12878	blood:	n/a	n/a
11	GABPA	chr1:161591976-161592178	K562	blood:	n/a	n/a
12	EBF1	chr1:161591823-161592114	GM12878	blood:	n/a	n/a
13	MAX	chr1:161591895-161592280	K562	blood:	n/a	n/a
14	FOXM1	chr1:161591048-161592095	GM12878	blood:	n/a	n/a
15	FOS	chr1:161591941-161592059	MCF10A-Er-Src	breast:	n/a	n/a
16	CEBPD	chr1:161591827-161592392	K562	blood:	n/a	n/a
17	CEBPB	chr1:161591730-161592248	K562	blood:	n/a	n/a
18	POLR2A	chr1:161591012-161592191	GM12892	blood:	n/a	n/a
19	BATF	chr1:161591602-161592224	GM12878	blood:	n/a	n/a
20	ATF1	chr1:161591904-161592261	K562	blood:	n/a	n/a
21	CBX3	chr1:161590923-161592499	K562	blood:	n/a	n/a
22	POLR2A	chr1:161591097-161592452	K562	blood:	n/a	n/a
23	YY1	chr1:161591947-161592159	K562	blood:	n/a	n/a
24	BHLHE40	chr1:161591940-161592139	K562	blood:	n/a	n/a
25	ELF1	chr1:161591839-161592258	K562	blood:	n/a	chr1:161592056-161592069
26	POLR2A	chr1:161591809-161592087	H1-hESC	embryonic stem cell:	n/a	n/a
27	IRF1	chr1:161590998-161592184	K562	blood:	n/a	chr1:161591070-161591079 chr1:161591569-161591576
28	SPI1	chr1:161591925-161592171	K562	blood:	n/a	chr1:161592057-161592070 chr1:161592056-161592069 chr1:161592032-161592039 chr1:161592058-161592067
29	PAX5	chr1:161591063-161592188	GM12878	blood:	n/a	n/a
30	SP1	chr1:161591096-161592043	GM12878	blood:	n/a	n/a
31	TBL1XR1	chr1:161591951-161592207	K562	blood:	n/a	n/a
32	MAX	chr1:161591937-161592148	K562	blood:	n/a	n/a
33	TEAD4	chr1:161590909-161592338	K562	blood:	n/a	n/a
34	FOS	chr1:161591952-161592140	MCF10A-Er-Src	breast:	n/a	n/a
35	GTF2F1	chr1:161591970-161592174	K562	blood:	n/a	n/a
36	MYC	chr1:161591053-161592162	K562	blood:	n/a	chr1:161591589-161591596
37	POLR2A	chr1:161591798-161592371	K562	blood:	n/a	n/a
38	ARID3A	chr1:161591948-161592122	K562	blood:	n/a	n/a
39	ELF1	chr1:161591940-161592320	K562	blood:	n/a	chr1:161592056-161592069
40	TAF1	chr1:161591847-161592219	K562	blood:	n/a	n/a
41	UBTF	chr1:161591964-161592165	K562	blood:	n/a	n/a
42	UBTF	chr1:161591146-161592278	K562	blood:	n/a	n/a
43	IRF4	chr1:161591039-161592201	GM12878	blood:	n/a	n/a
44	POLR2A	chr1:161591843-161592215	K562	blood:	n/a	n/a
45	HCFC1	chr1:161591964-161592096	K562	blood:	n/a	n/a
46	POLR2A	chr1:161591067-161592351	PBDE	blood:	n/a	n/a
47	POLR2A	chr1:161591969-161592208	K562	blood:	n/a	n/a
48	JUND	chr1:161591055-161592278	K562	blood:	n/a	chr1:161591071-161591079 chr1:161591070-161591080 chr1:161591069-161591081 chr1:161591070-161591080
49	MYC	chr1:161591940-161592141	MCF10A-Er-Src	breast:	n/a	n/a
50	HEY1	chr1:161591074-161592387	K562	blood:	n/a	chr1:161591606-161591621

No.	Distal block	Cell Line	Cell type
1	chr1:161591008..161595787-chr1:161695155..161699954,5	K562	blood:
2	chr1:161591472..161593367-chr1:161719465..161721558,2	K562	blood:
3	chr1:161557663..161559310-chr1:161591501..161593148,2	K562	blood:
4	chr1:161510415..161513451-chr1:161591719..161594596,3	K562	blood:
5	chr1:161509609..161513548-chr1:161589499..161593604,6	K562	blood:
6	chr1:161591405..161593904-chr1:161697560..161699954,2	K562	blood:

Variant related genes	Relation type
RPS23P9	TF binding region
ENSG00000162746	Chromatin interaction
ENSG00000081721	Chromatin interaction

Extended variants
information (count: 216 )
Associated
traits (count: 4 )

rSNPs within LD-proxies of this variant (count:16)

rs_ID	r²[population]
rs34160304	0.80[AFR][1000 genomes];0.88[AMR][1000 genomes];0.92[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs34416533	0.95[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs34566209	0.92[AFR][1000 genomes];0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs34881159	0.97[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs35181127	0.88[AFR][1000 genomes];0.90[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs35674644	0.98[EUR][1000 genomes]
rs36063867	0.97[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs36117182	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs61802329	0.80[AMR][1000 genomes];0.81[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs61802332	0.86[AFR][1000 genomes];0.86[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs61802333	0.85[AFR][1000 genomes];0.89[AMR][1000 genomes];0.90[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs61802334	0.92[AFR][1000 genomes];0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs61802996	0.97[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs61802998	0.96[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs67295569	0.93[EUR][1000 genomes]
rs72704050	0.83[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:200 , 50 per page) page: 1 2 3 4

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv432986	chr1:161221133-161673682	Flanking Active TSS Enhancers Bivalent Enhancer Active TSS Strong transcription Weak transcription Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	67 gene(s)	inside rSNPs	diseases
2	nsv432998	chr1:161335902-161673682	Active TSS Enhancers Flanking Active TSS Weak transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Strong transcription ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	62 gene(s)	inside rSNPs	diseases
3	nsv433009	chr1:161343927-161639328	Flanking Active TSS Bivalent Enhancer Weak transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Active TSS Enhancers ZNF genes & repeats Strong transcription Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	58 gene(s)	inside rSNPs	diseases
4	esv2756866	chr1:161344255-161681552	Bivalent Enhancer Enhancers Flanking Active TSS Weak transcription Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	62 gene(s)	inside rSNPs	diseases
5	esv2758972	chr1:161344255-161681552	Bivalent/Poised TSS Bivalent Enhancer Flanking Active TSS Enhancers Active TSS Flanking Bivalent TSS/Enh Weak transcription Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	62 gene(s)	inside rSNPs	diseases
6	nsv433020	chr1:161355634-161673682	Active TSS Enhancers Weak transcription Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	60 gene(s)	inside rSNPs	diseases
7	esv2754329	chr1:161355728-161673682	Active TSS Enhancers Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	60 gene(s)	inside rSNPs	diseases
8	nsv433031	chr1:161355728-161673682	Flanking Active TSS Active TSS Bivalent/Poised TSS Bivalent Enhancer Enhancers Weak transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Genic enhancers Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	60 gene(s)	inside rSNPs	diseases
9	nsv433042	chr1:161372038-161673682	Enhancers Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Weak transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' Genic enhancers Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	28 gene(s)	inside rSNPs	diseases
10	nsv433053	chr1:161389417-161673682	Enhancers Active TSS Flanking Active TSS Weak transcription Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Genic enhancers Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	26 gene(s)	inside rSNPs	diseases
11	nsv433075	chr1:161395555-161673682	Flanking Bivalent TSS/Enh Enhancers Active TSS Bivalent Enhancer Weak transcription Flanking Active TSS Bivalent/Poised TSS Genic enhancers Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	25 gene(s)	inside rSNPs	diseases
12	nsv831725	chr1:161403030-161666732	Bivalent/Poised TSS Flanking Active TSS Weak transcription Enhancers Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	22 gene(s)	inside rSNPs	diseases
13	esv2757757	chr1:161406313-161624427	Active TSS Flanking Active TSS Enhancers Bivalent/Poised TSS Bivalent Enhancer Weak transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	19 gene(s)	inside rSNPs	diseases
14	nsv428257	chr1:161406315-161868263	Bivalent/Poised TSS Genic enhancers Active TSS Transcr. at gene 5' and 3' Enhancers Weak transcription Bivalent Enhancer Strong transcription Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	50 gene(s)	inside rSNPs	diseases
15	esv1821964	chr1:161410458-161642332	Active TSS Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Weak transcription Bivalent Enhancer Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	19 gene(s)	inside rSNPs	diseases
16	esv1812323	chr1:161413114-161624425	Active TSS Weak transcription Flanking Active TSS Enhancers Strong transcription Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	17 gene(s)	inside rSNPs	diseases
17	esv1814016	chr1:161413114-161624425	Weak transcription Active TSS Bivalent/Poised TSS Flanking Active TSS Enhancers Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	17 gene(s)	inside rSNPs	diseases
18	nsv427841	chr1:161413114-161624425	Active TSS Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Weak transcription Bivalent Enhancer Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	17 gene(s)	inside rSNPs	diseases
19	nsv831736	chr1:161413123-161624424	Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Weak transcription Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS Genic enhancers Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	17 gene(s)	inside rSNPs	diseases
20	esv1824713	chr1:161414555-161642332	Enhancers Active TSS Flanking Bivalent TSS/Enh Weak transcription Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Genic enhancers Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	17 gene(s)	inside rSNPs	diseases
21	esv1821631	chr1:161414640-161644896	Enhancers Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Active TSS Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	18 gene(s)	inside rSNPs	diseases
22	esv2750812	chr1:161463498-161639559	Active TSS Weak transcription Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers Bivalent Enhancer Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	17 gene(s)	inside rSNPs	diseases
23	esv2752696	chr1:161463498-161639559	Enhancers Weak transcription Bivalent/Poised TSS Bivalent Enhancer Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	17 gene(s)	inside rSNPs	diseases
24	esv2750813	chr1:161463498-161673682	Enhancers Weak transcription Bivalent/Poised TSS Active TSS Flanking Active TSS Genic enhancers Strong transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	21 gene(s)	inside rSNPs	diseases
25	esv2750814	chr1:161463498-161673682	Active TSS Bivalent Enhancer Enhancers Flanking Active TSS Weak transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Genic enhancers Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	21 gene(s)	inside rSNPs	diseases
26	esv2755678	chr1:161463498-161678377	Enhancers Flanking Active TSS Bivalent Enhancer Weak transcription Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Strong transcription Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	21 gene(s)	inside rSNPs	diseases
27	esv2752664	chr1:161463601-161673682	Bivalent/Poised TSS Active TSS Flanking Active TSS Enhancers Weak transcription Bivalent Enhancer Strong transcription Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	21 gene(s)	inside rSNPs	diseases
28	esv2756399	chr1:161463814-161639559	Bivalent Enhancer Active TSS ZNF genes & repeats Enhancers Weak transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Active TSS Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	17 gene(s)	inside rSNPs	diseases
29	nsv433086	chr1:161465420-161639559	Flanking Active TSS Strong transcription Enhancers Active TSS Flanking Bivalent TSS/Enh Weak transcription Bivalent/Poised TSS Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	17 gene(s)	inside rSNPs	diseases
30	esv1799809	chr1:161467963-161650576	Flanking Active TSS Enhancers Active TSS Weak transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Strong transcription Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	19 gene(s)	inside rSNPs	diseases
31	esv1819152	chr1:161473564-161647435	Enhancers Active TSS Weak transcription Flanking Active TSS Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	19 gene(s)	inside rSNPs	diseases
32	esv1813267	chr1:161473564-161650576	Flanking Active TSS Active TSS Weak transcription Enhancers Strong transcription Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	19 gene(s)	inside rSNPs	diseases
33	esv1815625	chr1:161475983-161650576	Enhancers Bivalent Enhancer Active TSS Weak transcription Flanking Active TSS Bivalent/Poised TSS Genic enhancers Strong transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	19 gene(s)	inside rSNPs	diseases
34	esv1850573	chr1:161475983-161650576	Enhancers Active TSS Flanking Active TSS Bivalent/Poised TSS Weak transcription Flanking Bivalent TSS/Enh Strong transcription Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	19 gene(s)	inside rSNPs	diseases
35	nsv1007723	chr1:161476489-161638501	Enhancers Active TSS Weak transcription Bivalent/Poised TSS Flanking Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	17 gene(s)	inside rSNPs	diseases
36	nsv8502	chr1:161477348-161646550	Enhancers Flanking Active TSS Weak transcription Bivalent/Poised TSS Genic enhancers Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	18 gene(s)	inside rSNPs	diseases
37	nsv1005277	chr1:161478524-161638501	Transcr. at gene 5' and 3' Active TSS Flanking Active TSS Enhancers Weak transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Strong transcription Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	17 gene(s)	inside rSNPs	diseases
38	esv2763869	chr1:161478536-161638530	Weak transcription Active TSS Bivalent Enhancer Flanking Active TSS Bivalent/Poised TSS Enhancers Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	17 gene(s)	inside rSNPs	diseases
39	esv33393	chr1:161478681-162080327	Weak transcription Enhancers Strong transcription Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS Active TSS Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	59 gene(s)	inside rSNPs	diseases
40	nsv433097	chr1:161478751-161639559	Enhancers Active TSS Weak transcription Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer Strong transcription Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	17 gene(s)	inside rSNPs	diseases
41	esv1815003	chr1:161479291-161647435	Active TSS Weak transcription Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Genic enhancers Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	19 gene(s)	inside rSNPs	diseases
42	esv1808606	chr1:161479291-161649074	Active TSS Bivalent/Poised TSS Flanking Active TSS Enhancers Weak transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Strong transcription Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	19 gene(s)	inside rSNPs	diseases
43	esv1805208	chr1:161479438-161648225	Enhancers Bivalent/Poised TSS Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	19 gene(s)	inside rSNPs	diseases
44	nsv519779	chr1:161479745-161638386	Enhancers Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	17 gene(s)	inside rSNPs	diseases
45	nsv464173	chr1:161479745-161646807	Flanking Active TSS Enhancers Active TSS Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	18 gene(s)	inside rSNPs	diseases
46	nsv825176	chr1:161479845-161646878	Active TSS Enhancers Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats Genic enhancers Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	18 gene(s)	inside rSNPs	diseases
47	nsv820341	chr1:161479845-161648148	Transcr. at gene 5' and 3' Bivalent/Poised TSS Enhancers Flanking Active TSS Active TSS Weak transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers ZNF genes & repeats Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	19 gene(s)	inside rSNPs	diseases
48	esv1814148	chr1:161479861-161644896	Active TSS Enhancers Bivalent/Poised TSS Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS Transcr. at gene 5' and 3' Strong transcription ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	18 gene(s)	inside rSNPs	diseases
49	esv1844518	chr1:161479861-161646722	Enhancers Bivalent Enhancer Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS ZNF genes & repeats Genic enhancers Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	18 gene(s)	inside rSNPs	diseases
50	esv12861	chr1:161479945-161646758	Active TSS Enhancers Flanking Active TSS Weak transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	18 gene(s)	inside rSNPs	diseases

mRNA abundance (count:4)

SNP	Gene	Cis/trans	Tissue	Source
rs2085694	FCGR2B	cis	Whole Blood	GTEx
rs2085694	HSPA6	Cis_1M	lymphoblastoid	RTeQTL
rs2085694	FCRLA	Cis_1M	lymphoblastoid	RTeQTL
rs2085694	FCGR2A	Cis_1M	lymphoblastoid	RTeQTL

Chromatin state (count:60 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:161590400-161592000	Active TSS	H9 Cell Line	embryonic stem cell
2	chr1:161590400-161592000	Bivalent/Poised TSS	iPS-18 Cell Line	embryonic stem cell
3	chr1:161590400-161592200	Bivalent/Poised TSS	H1 Cell Line	embryonic stem cell
4	chr1:161590400-161592200	Active TSS	A549	lung
5	chr1:161590600-161592000	Active TSS	iPS-15b Cell Line	embryonic stem cell
6	chr1:161590600-161592000	Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
7	chr1:161590600-161592000	Active TSS	Hela-S3	cervix
8	chr1:161590600-161592200	Active TSS	ES-I3 Cell Line	embryonic stem cell
9	chr1:161590600-161592200	Bivalent/Poised TSS	iPS-20b Cell Line	embryonic stem cell
10	chr1:161590600-161592200	Active TSS	iPS DF 6.9 Cell Line	embryonic stem cell
11	chr1:161590600-161592200	Flanking Active TSS	Primary hematopoietic stem cells short term culture	blood
12	chr1:161590600-161592200	Active TSS	NH-A	brain
13	chr1:161590800-161592000	Bivalent/Poised TSS	Fetal Lung	lung
14	chr1:161590800-161592000	Active TSS	K562	blood
15	chr1:161590800-161592200	Active TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
16	chr1:161591000-161592000	Flanking Active TSS	Primary neutrophils fromperipheralblood	blood
17	chr1:161591000-161592000	Flanking Bivalent TSS/Enh	Monocytes-CD14+_RO01746	blood
18	chr1:161591000-161592200	Flanking Bivalent TSS/Enh	Primary hematopoietic stem cells G-CSF-mobilized Male	--
19	chr1:161591000-161592200	Active TSS	Primary mononuclear cells fromperipheralblood	Blood
20	chr1:161591000-161592200	Active TSS	Brain Cingulate Gyrus	brain
21	chr1:161591000-161592200	Active TSS	Duodenum Mucosa	Duodenum
22	chr1:161591200-161592000	Flanking Active TSS	Primary T helper cells fromperipheralblood	blood
23	chr1:161591200-161592200	Bivalent/Poised TSS	HUES64 Cell Line	embryonic stem cell
24	chr1:161591200-161592200	Flanking Active TSS	Primary Natural Killer cells fromperipheralblood	blood
25	chr1:161591200-161592200	Bivalent/Poised TSS	Rectal Mucosa Donor 29	rectum
26	chr1:161591200-161592200	Enhancers	Spleen	Spleen
27	chr1:161591400-161592200	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
28	chr1:161591400-161592200	Flanking Active TSS	Primary B cells from cord blood	blood
29	chr1:161591400-161592200	Bivalent Enhancer	Fetal Thymus	thymus
30	chr1:161591400-161592400	Flanking Active TSS	GM12878-XiMat	blood
31	chr1:161591600-161592000	Flanking Active TSS	Foreskin Keratinocyte Primary Cells skin03	Skin
32	chr1:161591600-161592200	Bivalent/Poised TSS	HUES6 Cell Line	embryonic stem cell
33	chr1:161591600-161592200	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Female	--
34	chr1:161591600-161592200	Bivalent/Poised TSS	Colonic Mucosa	Colon
35	chr1:161591600-161592200	Enhancers	Pancreas	Pancrea
36	chr1:161591800-161592000	Bivalent/Poised TSS	HUES48 Cell Line	embryonic stem cell
37	chr1:161591800-161592000	Active TSS	Primary T cells fromperipheralblood	blood
38	chr1:161591800-161592000	Active TSS	Primary hematopoietic stem cells	blood
39	chr1:161591800-161592000	Enhancers	Primary T helper naive cells from peripheral blood	blood
40	chr1:161591800-161592000	Enhancers	Primary T killer memory cells from peripheral blood	blood
41	chr1:161591800-161592000	Enhancers	Muscle Satellite Cultured Cells	--
42	chr1:161591800-161592200	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
43	chr1:161591800-161592200	Flanking Active TSS	Primary T helper cells PMA-I stimulated	--
44	chr1:161591800-161592200	Bivalent Enhancer	Primary T regulatory cells fromperipheralblood	blood
45	chr1:161591800-161592200	Active TSS	Primary T cells effector/memory enriched fromperipheralblood	blood
46	chr1:161591800-161592200	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
47	chr1:161591800-161592200	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
48	chr1:161591800-161592200	Enhancers	Adipose Nuclei	Adipose
49	chr1:161591800-161592200	Bivalent Enhancer	Fetal Adrenal Gland	Adrenal Gland
50	chr1:161591800-161592200	Enhancers	Placenta	Placenta

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