Variant report

Variant	rs2095492
Chromosome Location	chr14:56274784-56274785
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr14:56273918..56276327-chr14:56286651..56288892,2	MCF-7	breast:
2	chr14:56256977..56259600-chr14:56273193..56275837,3	K562	blood:

Extended variants
information (count: 5 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:2)

rs_ID	r²[population]
rs10135742	1.00[AFR][1000 genomes];0.82[EUR][1000 genomes]
rs2210781	1.00[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832804	chr14:56083850-56277632	Strong transcription Enhancers Weak transcription Genic enhancers Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	10 gene(s)	inside rSNPs	diseases
2	nsv901966	chr14:56160904-56436203	Weak transcription Bivalent Enhancer Enhancers ZNF genes & repeats Flanking Active TSS Active TSS Bivalent/Poised TSS Strong transcription Genic enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
3	nsv901977	chr14:56213392-56492996	Enhancers Active TSS Flanking Active TSS Weak transcription Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:53 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:56269200-56275200	Enhancers	Fetal Intestine Small	intestine
2	chr14:56269600-56275200	Enhancers	Pancreas	Pancrea
3	chr14:56270600-56275200	Enhancers	Primary T cells fromperipheralblood	blood
4	chr14:56271200-56275200	Enhancers	Fetal Intestine Large	intestine
5	chr14:56271600-56275200	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
6	chr14:56271800-56274800	Enhancers	Fetal Adrenal Gland	Adrenal Gland
7	chr14:56272000-56275200	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
8	chr14:56272400-56275400	Enhancers	Primary T helper cells fromperipheralblood	blood
9	chr14:56273200-56274800	Enhancers	Left Ventricle	heart
10	chr14:56273200-56274800	Enhancers	HMEC	breast
11	chr14:56273400-56274800	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
12	chr14:56273400-56274800	Enhancers	Right Atrium	heart
13	chr14:56273400-56274800	Enhancers	Sigmoid Colon	Sigmoid Colon
14	chr14:56273400-56274800	Enhancers	NHEK	skin
15	chr14:56273400-56275000	Enhancers	Colonic Mucosa	Colon
16	chr14:56273400-56275000	Enhancers	Small Intestine	intestine
17	chr14:56273400-56275000	Enhancers	HUVEC	blood vessel
18	chr14:56273400-56275200	Enhancers	Primary T helper naive cells fromperipheralblood	blood
19	chr14:56273400-56275200	Enhancers	Primary T killer naive cells fromperipheralblood	blood
20	chr14:56273400-56275200	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
21	chr14:56273600-56274800	Enhancers	Esophagus	oesophagus
22	chr14:56273600-56274800	Enhancers	Fetal Muscle Leg	muscle
23	chr14:56273600-56274800	Enhancers	Lung	lung
24	chr14:56273600-56275000	Flanking Active TSS	Dnd41	blood
25	chr14:56273600-56275200	Enhancers	Primary T cells effector/memory enriched fromperipheralblood	blood
26	chr14:56273800-56275000	Enhancers	Brain Inferior Temporal Lobe	brain
27	chr14:56273800-56275000	Enhancers	Fetal Lung	lung
28	chr14:56273800-56275000	Enhancers	Skeletal Muscle Male	skeletal muscle
29	chr14:56273800-56275000	Enhancers	Spleen	Spleen
30	chr14:56273800-56275200	Enhancers	Stomach Mucosa	stomach
31	chr14:56274000-56274800	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
32	chr14:56274000-56274800	Enhancers	Brain Substantia Nigra	brain
33	chr14:56274000-56275000	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
34	chr14:56274000-56275200	Enhancers	Brain Cingulate Gyrus	brain
35	chr14:56274200-56274800	Flanking Active TSS	Primary T helper memory cells from peripheral blood 2	blood
36	chr14:56274200-56274800	Flanking Active TSS	Primary T helper naive cells from peripheral blood	blood
37	chr14:56274200-56274800	Flanking Active TSS	Primary T killer memory cells from peripheral blood	blood
38	chr14:56274200-56274800	Flanking Active TSS	Duodenum Mucosa	Duodenum
39	chr14:56274200-56274800	Flanking Active TSS	Rectal Mucosa Donor 29	rectum
40	chr14:56274200-56274800	Flanking Active TSS	Rectal Mucosa Donor 31	rectum
41	chr14:56274400-56274800	Enhancers	Primary T cells from cord blood	blood
42	chr14:56274400-56274800	Flanking Active TSS	Brain Hippocampus Middle	brain
43	chr14:56274400-56274800	Bivalent Enhancer	Fetal Heart	heart
44	chr14:56274400-56274800	Enhancers	Gastric	stomach
45	chr14:56274400-56275000	Enhancers	Brain Angular Gyrus	brain
46	chr14:56274400-56275000	Enhancers	Brain Anterior Caudate	brain
47	chr14:56274400-56275000	Enhancers	Skeletal Muscle Female	skeletal muscle
48	chr14:56274400-56275200	Enhancers	Primary T helper cells PMA-I stimulated	--
49	chr14:56274600-56274800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
50	chr14:56274600-56274800	Flanking Active TSS	Adipose Nuclei	Adipose

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