Variant report

Variant	rs209808
Chromosome Location	chr6:11964935-11964936
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 8 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:8)

rs_ID	r²[population]
rs12193434	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16872098	0.89[EUR][1000 genomes]
rs169716	0.90[AFR][1000 genomes];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs209799	0.85[AFR][1000 genomes];0.97[ASN][1000 genomes]
rs209811	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6939106	0.87[JPT][hapmap]
rs7775818	0.87[CEU][hapmap];0.89[EUR][1000 genomes]
rs9349041	0.91[ASN][1000 genomes]

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:11961200-11966200	Enhancers	K562	blood
2	chr6:11961400-11972600	Weak transcription	Lung	lung
3	chr6:11963600-11966600	Enhancers	Fetal Intestine Large	intestine
4	chr6:11964200-11969200	Weak transcription	Aorta	Aorta
5	chr6:11964600-11966400	Enhancers	Fetal Intestine Small	intestine
6	chr6:11964800-11966000	ZNF genes & repeats	ES-I3 Cell Line	embryonic stem cell

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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