Variant report

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	MAFK	chr6:11995040-11995545	H1-hESC	embryonic stem cell:	n/a	chr6:11995246-11995261
2	STAT3	chr6:11994960-11995445	MCF10A-Er-Src	breast:	n/a	n/a
3	CBX3	chr6:11995021-11995665	K562	blood:	n/a	n/a

Variant related genes	Relation type
ENSG00000225102	TF binding region

rSNPs within LD-proxies of this variant (count:31)

rs_ID	r²[population]
rs10456088	0.81[ASN][1000 genomes]
rs12111124	0.86[AFR][1000 genomes]
rs12189667	0.96[ASN][1000 genomes]
rs12190182	0.86[ASN][1000 genomes]
rs12190917	0.92[ASN][1000 genomes]
rs12191113	1.00[ASN][1000 genomes]
rs12192522	0.91[ASN][1000 genomes]
rs12198183	0.81[ASN][1000 genomes]
rs12199764	0.82[ASN][1000 genomes]
rs12202320	1.00[CEU][hapmap];0.90[CHB][hapmap];0.93[JPT][hapmap];0.81[ASN][1000 genomes]
rs12202388	1.00[CEU][hapmap];0.89[CHB][hapmap];0.93[JPT][hapmap];0.81[ASN][1000 genomes]
rs12202981	0.96[ASN][1000 genomes]
rs12204035	1.00[CEU][hapmap];1.00[CHB][hapmap];0.93[JPT][hapmap];0.97[ASN][1000 genomes]
rs12205721	1.00[CEU][hapmap];0.89[CHB][hapmap];0.92[JPT][hapmap];0.82[ASN][1000 genomes]
rs12207789	0.90[CHB][hapmap]
rs12208282	1.00[CEU][hapmap];0.91[JPT][hapmap];0.82[ASN][1000 genomes]
rs12209572	0.89[CHB][hapmap]
rs12210876	0.92[ASN][1000 genomes]
rs12212747	0.96[ASN][1000 genomes]
rs12213062	1.00[CHB][hapmap];0.86[JPT][hapmap];0.96[ASN][1000 genomes]
rs12213771	0.86[AFR][1000 genomes];0.91[ASN][1000 genomes]
rs12216165	1.00[CEU][hapmap]
rs28489887	1.00[ASN][1000 genomes]
rs28888496	0.81[ASN][1000 genomes]
rs57671359	0.82[ASN][1000 genomes]
rs58002962	0.87[ASN][1000 genomes]
rs60027663	0.87[ASN][1000 genomes]
rs60683973	0.82[ASN][1000 genomes]
rs60765903	0.96[ASN][1000 genomes]
rs6910744	0.81[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs7767368	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:11990800-12007200	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
2	chr6:11994000-11996600	Weak transcription	H9 Cell Line	embryonic stem cell
3	chr6:11995000-11995400	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
4	chr6:11995000-11995600	Enhancers	Hela-S3	cervix
5	chr6:11995000-11995600	Enhancers	K562	blood

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