Variant report

Variant	rs12191113
Chromosome Location	chr6:11996436-11996437
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Variant related genes	Relation type
ENSG00000225102	TF binding region
ENSG00000095951	Chromatin interaction
ENSG00000229896	Chromatin interaction
ENSG00000225102	Chromatin interaction

Extended variants
information (count: 26 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:26)

rs_ID	r²[population]
rs10456088	0.81[ASN][1000 genomes]
rs12189667	1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12190182	1.00[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs12190917	1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12192522	1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs12198183	1.00[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs12199764	0.82[ASN][1000 genomes]
rs12202320	1.00[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs12202388	1.00[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs12202981	1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12204035	1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12205721	1.00[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs12208282	1.00[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs12210876	1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12212747	1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12213062	1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12213771	0.91[ASN][1000 genomes]
rs12216165	1.00[EUR][1000 genomes]
rs28489887	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28888496	1.00[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs57671359	0.82[ASN][1000 genomes]
rs58002962	1.00[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs60027663	1.00[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs60683973	1.00[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs60765903	1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6939106	1.00[ASN][1000 genomes]

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:11990800-12007200	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
2	chr6:11994000-11996600	Weak transcription	H9 Cell Line	embryonic stem cell
3	chr6:11995400-11999400	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
4	chr6:11995600-12001400	Weak transcription	K562	blood
5	chr6:11995600-12007800	Weak transcription	Hela-S3	cervix

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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