Variant report

Variant	rs210130
Chromosome Location	chr6:33533404-33533405
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:4)

rs_ID	r²[population]
rs210132	1.00[CEU][hapmap];0.89[YRI][hapmap];0.91[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs210157	0.85[AMR][1000 genomes];0.84[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs6918046	0.82[ASN][1000 genomes]
rs9469485	0.88[CHB][hapmap]

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:33516800-33537600	Weak transcription	Primary T cells fromperipheralblood	blood
2	chr6:33521200-33533800	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
3	chr6:33530400-33534400	Weak transcription	HMEC	breast
4	chr6:33530400-33534600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
5	chr6:33530400-33536800	Weak transcription	K562	blood
6	chr6:33530400-33537600	Weak transcription	GM12878-XiMat	blood
7	chr6:33530400-33538800	Weak transcription	Esophagus	oesophagus
8	chr6:33531000-33538200	Weak transcription	Primary T cells from cord blood	blood
9	chr6:33531400-33538400	Weak transcription	Osteobl	bone
10	chr6:33533200-33538400	Weak transcription	Primary hematopoietic stem cells short term culture	blood
11	chr6:33533200-33538600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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