Variant report

Variant rs2107401
Chromosome Location chr22:31253230-31253231
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:19 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr22:31249200-31256400 Weak transcription Brain Inferior Temporal Lobe brain
2 chr22:31249400-31259000 Weak transcription HSMM muscle
3 chr22:31251200-31253400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
4 chr22:31251600-31256800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
5 chr22:31251800-31264200 Weak transcription Fetal Muscle Leg muscle
6 chr22:31252000-31253400 Enhancers Brain Dorsolateral Prefrontal Cortex brain
7 chr22:31252000-31255000 Weak transcription Hela-S3 cervix
8 chr22:31252000-31256600 Weak transcription Brain Angular Gyrus brain
9 chr22:31252200-31255000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
10 chr22:31252200-31255000 Weak transcription Psoas Muscle Psoas
11 chr22:31252200-31255000 Weak transcription Skeletal Muscle Male skeletal muscle
12 chr22:31252400-31255000 Weak transcription Skeletal Muscle Female skeletal muscle
13 chr22:31252400-31255000 Weak transcription NHEK skin
14 chr22:31252800-31253400 Enhancers Primary hematopoietic stem cells short term culture blood
15 chr22:31252800-31253400 Enhancers Brain Hippocampus Middle brain
16 chr22:31252800-31253400 Enhancers Fetal Adrenal Gland Adrenal Gland
17 chr22:31252800-31253800 Enhancers Fetal Lung lung
18 chr22:31253000-31253400 Enhancers Lung lung
19 chr22:31253000-31253800 Enhancers iPS DF 19.11 Cell Line embryonic stem cell

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