Variant report

Variant rs2115093
Chromosome Location chr19:20978027-20978028
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:112 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:20959600-20978200 Weak transcription Spleen Spleen
2 chr19:20959800-20978400 Weak transcription Skeletal Muscle Male skeletal muscle
3 chr19:20960000-20978200 Weak transcription Pancreas Pancrea
4 chr19:20960000-20978400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
5 chr19:20960000-20978400 Weak transcription Brain Cingulate Gyrus brain
6 chr19:20960000-20978400 Weak transcription HSMM muscle
7 chr19:20960000-20983800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
8 chr19:20960000-20987600 Weak transcription Brain Substantia Nigra brain
9 chr19:20960000-20987800 Weak transcription Placenta Amnion Placenta Amnion
10 chr19:20960200-20979600 Weak transcription Pancreatic Islets Pancreatic Islet
11 chr19:20960200-20979600 Weak transcription NH-A brain
12 chr19:20960200-20987200 Weak transcription Colon Smooth Muscle Colon
13 chr19:20960200-20990400 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
14 chr19:20961200-20989600 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
15 chr19:20962400-20978400 Weak transcription Osteobl bone
16 chr19:20966400-20985400 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
17 chr19:20966800-20978600 Weak transcription Placenta Placenta
18 chr19:20967600-20978200 Weak transcription Primary T killer memory cells from peripheral blood blood
19 chr19:20967800-20978400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
20 chr19:20968000-20978400 Weak transcription HepG2 liver
21 chr19:20968200-20978600 Weak transcription Skeletal Muscle Female skeletal muscle
22 chr19:20968400-20978400 Weak transcription Adipose Nuclei Adipose
23 chr19:20968400-20979600 Weak transcription Rectal Smooth Muscle rectum
24 chr19:20968400-20980600 Weak transcription Colonic Mucosa Colon
25 chr19:20968800-20978200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
26 chr19:20968800-20978400 Weak transcription Left Ventricle heart
27 chr19:20969600-20981000 Weak transcription Psoas Muscle Psoas
28 chr19:20971000-20980600 Weak transcription Muscle Satellite Cultured Cells --
29 chr19:20973000-20978200 Weak transcription Fetal Muscle Trunk muscle
30 chr19:20973000-20978200 Weak transcription Rectal Mucosa Donor 29 rectum
31 chr19:20974600-20978400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
32 chr19:20974800-20992000 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
33 chr19:20975000-20978800 Weak transcription Right Ventricle heart
34 chr19:20975200-20978400 Strong transcription H1 Cell Line embryonic stem cell
35 chr19:20975200-20978400 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
36 chr19:20975200-20979600 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
37 chr19:20975200-20982200 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
38 chr19:20975200-20983600 ZNF genes & repeats Primary T helper cells fromperipheralblood blood
39 chr19:20975200-20983600 ZNF genes & repeats Monocytes-CD14+_RO01746 blood
40 chr19:20975200-20984800 ZNF genes & repeats H9 Derived Neuron Cultured Cells ES cell derived
41 chr19:20975200-20989400 ZNF genes & repeats Primary hematopoietic stem cells blood
42 chr19:20975200-20992000 ZNF genes & repeats iPS-20b Cell Line embryonic stem cell
43 chr19:20975400-20978400 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
44 chr19:20975400-20979000 ZNF genes & repeats Primary monocytes fromperipheralblood blood
45 chr19:20975400-20982000 Weak transcription Brain Anterior Caudate brain
46 chr19:20975600-20980200 Strong transcription Breast Myoepithelial Primary Cells Breast
47 chr19:20975600-20981600 ZNF genes & repeats Brain Germinal Matrix brain
48 chr19:20975600-20984400 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
49 chr19:20975600-20984800 ZNF genes & repeats ES-I3 Cell Line embryonic stem cell
50 chr19:20975600-20985400 ZNF genes & repeats Ganglion Eminence derived primary cultured neurospheres brain

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