Variant report

Variant	rs211614
Chromosome Location	chr6:133725010-133725011
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 13 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:13)

rs_ID	r²[population]
rs159411	0.92[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs159412	1.00[AFR][1000 genomes];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs159419	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs159420	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs159421	0.85[EUR][1000 genomes]
rs159422	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs159427	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs169827	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs211613	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs211618	0.88[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs455704	0.96[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs465147	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs62429386	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]

No data

Chromatin state (count:14 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:133716000-133728600	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
2	chr6:133718200-133728600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
3	chr6:133718400-133725800	Weak transcription	Skeletal Muscle Female	skeletal muscle
4	chr6:133718600-133725400	Weak transcription	Skeletal Muscle Male	skeletal muscle
5	chr6:133718600-133725800	Weak transcription	Psoas Muscle	Psoas
6	chr6:133719800-133728200	Weak transcription	Cortex derived primary cultured neurospheres	brain
7	chr6:133720200-133748400	Weak transcription	Hela-S3	cervix
8	chr6:133720400-133749600	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
9	chr6:133723400-133728200	Weak transcription	HUES64 Cell Line	embryonic stem cell
10	chr6:133723400-133728600	Weak transcription	ES-I3 Cell Line	embryonic stem cell
11	chr6:133724000-133726000	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
12	chr6:133725000-133725200	Enhancers	Ovary	ovary
13	chr6:133725000-133725600	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
14	chr6:133725000-133726000	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links