Variant report

Variant	rs2127015
Chromosome Location	chr15:73985223-73985224
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr15:73537335..73540312-chr15:73984366..73986218,2	K562	blood:
2	chr15:73975160..73977324-chr15:73984548..73987119,2	K562	blood:
3	chr15:73983004..73985987-chr15:73987147..73989619,3	MCF-7	breast:
4	chr15:73956703..73958906-chr15:73984345..73986661,2	MCF-7	breast:

Variant related genes	Relation type
ENSG00000103855	Chromatin interaction

rs_ID	r²[population]
rs11072431	0.85[CEU][hapmap]
rs11852484	0.84[EUR][1000 genomes]
rs12594595	0.84[CEU][hapmap];0.83[JPT][hapmap];0.83[AFR][1000 genomes];0.93[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs12594627	0.84[EUR][1000 genomes]
rs2291013	0.92[CEU][hapmap]
rs57771618	0.82[ASN][1000 genomes]
rs57909886	0.90[AMR][1000 genomes];0.84[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7176654	0.96[CEU][hapmap]
rs7497012	0.81[ASN][1000 genomes]

Chromatin state (count:98 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:73978800-73989000	Weak transcription	Fetal Kidney	kidney
2	chr15:73978800-74000800	Weak transcription	Pancreatic Islets	Pancreatic Islet
3	chr15:73979000-73985400	Enhancers	Adipose Nuclei	Adipose
4	chr15:73979400-73986200	Weak transcription	Psoas Muscle	Psoas
5	chr15:73979400-73986800	Weak transcription	Aorta	Aorta
6	chr15:73979400-73989000	Weak transcription	Fetal Intestine Large	intestine
7	chr15:73979400-73996400	Weak transcription	A549	lung
8	chr15:73980200-73988400	Weak transcription	Rectal Mucosa Donor 29	rectum
9	chr15:73980400-73986200	Weak transcription	Brain Inferior Temporal Lobe	brain
10	chr15:73980600-73988400	Weak transcription	Breast Myoepithelial Primary Cells	Breast
11	chr15:73980600-73988400	Weak transcription	Brain Cingulate Gyrus	brain
12	chr15:73981400-73988000	Weak transcription	Spleen	Spleen
13	chr15:73981600-73986000	Weak transcription	Gastric	stomach
14	chr15:73981600-73986400	Weak transcription	Duodenum Mucosa	Duodenum
15	chr15:73981600-73987000	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
16	chr15:73981800-73995000	Weak transcription	Pancreas	Pancrea
17	chr15:73982000-73985800	Weak transcription	HepG2	liver
18	chr15:73982200-73986000	Weak transcription	Liver	Liver
19	chr15:73982400-73986000	Weak transcription	Lung	lung
20	chr15:73982400-73986200	Weak transcription	Ovary	ovary
21	chr15:73982600-73990000	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
22	chr15:73983600-73986400	Enhancers	Skeletal Muscle Female	skeletal muscle
23	chr15:73984000-73986000	Weak transcription	Fetal Stomach	stomach
24	chr15:73984000-73986600	Genic enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
25	chr15:73984200-73985400	Weak transcription	HSMM	muscle
26	chr15:73984200-73986000	Weak transcription	HSMMtube	muscle
27	chr15:73984200-73986200	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
28	chr15:73984200-73986400	Weak transcription	NH-A	brain
29	chr15:73984200-73988000	Weak transcription	Brain Substantia Nigra	brain
30	chr15:73984200-73988200	Weak transcription	HUVEC	blood vessel
31	chr15:73984200-73988800	Weak transcription	Sigmoid Colon	Sigmoid Colon
32	chr15:73984400-73985800	Weak transcription	Brain Angular Gyrus	brain
33	chr15:73984400-73986000	Weak transcription	Primary hematopoietic stem cells short term culture	blood
34	chr15:73984400-73986000	Weak transcription	Fetal Brain Male	brain
35	chr15:73984400-73986000	Weak transcription	Stomach Smooth Muscle	stomach
36	chr15:73984400-73986200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
37	chr15:73984400-73986200	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
38	chr15:73984400-73986200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
39	chr15:73984400-73986200	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
40	chr15:73984400-73986200	Weak transcription	Duodenum Smooth Muscle	Duodenum
41	chr15:73984400-73986200	Weak transcription	Fetal Heart	heart
42	chr15:73984400-73986200	Weak transcription	Osteobl	bone
43	chr15:73984400-73986400	Weak transcription	Brain Anterior Caudate	brain
44	chr15:73984400-73986400	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
45	chr15:73984400-73986400	Weak transcription	Colon Smooth Muscle	Colon
46	chr15:73984400-73986400	Weak transcription	Esophagus	oesophagus
47	chr15:73984400-73986400	Weak transcription	Fetal Lung	lung
48	chr15:73984400-73986400	Weak transcription	Rectal Mucosa Donor 31	rectum
49	chr15:73984400-73986400	Weak transcription	Rectal Smooth Muscle	rectum
50	chr15:73984400-73986400	Weak transcription	Stomach Mucosa	stomach

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