Variant report

Variant	rs212764
Chromosome Location	chr6:133790493-133790494
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 7 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:7)

rs_ID	r²[population]
rs212778	0.84[CEU][hapmap];1.00[CHB][hapmap];0.81[AMR][1000 genomes];0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs509453	0.95[CEU][hapmap];1.00[CHB][hapmap];0.87[CHD][hapmap];0.97[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];0.84[MEX][hapmap];0.81[TSI][hapmap];0.93[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs523571	0.86[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.94[AFR][1000 genomes];0.90[AMR][1000 genomes];0.90[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs611186	1.00[AFR][1000 genomes];0.93[AMR][1000 genomes];0.86[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs643202	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];0.90[AMR][1000 genomes];0.90[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6911807	0.86[CEU][hapmap];1.00[CHB][hapmap];0.88[AMR][1000 genomes];0.86[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs9375967	0.89[AFR][1000 genomes];0.86[AMR][1000 genomes];0.83[EUR][1000 genomes];0.91[ASN][1000 genomes]

No data

Chromatin state (count:17 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:133765800-133822000	Weak transcription	Psoas Muscle	Psoas
2	chr6:133780800-133796800	Weak transcription	NHLF	lung
3	chr6:133782000-133811600	Weak transcription	A549	lung
4	chr6:133782400-133806400	Weak transcription	Fetal Muscle Leg	muscle
5	chr6:133784000-133813000	Weak transcription	HSMMtube	muscle
6	chr6:133786600-133812400	Weak transcription	Fetal Kidney	kidney
7	chr6:133786800-133807400	Weak transcription	Fetal Muscle Trunk	muscle
8	chr6:133787400-133822800	Weak transcription	Fetal Lung	lung
9	chr6:133789000-133790800	Strong transcription	Cortex derived primary cultured neurospheres	brain
10	chr6:133789200-133790800	Strong transcription	Hela-S3	cervix
11	chr6:133789600-133790800	Strong transcription	Skeletal Muscle Female	skeletal muscle
12	chr6:133789800-133791400	Weak transcription	NH-A	brain
13	chr6:133790000-133791000	ZNF genes & repeats	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
14	chr6:133790200-133796800	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
15	chr6:133790400-133790800	Strong transcription	Skeletal Muscle Male	skeletal muscle
16	chr6:133790400-133791000	ZNF genes & repeats	Ganglion Eminence derived primary cultured neurospheres	brain
17	chr6:133790400-133794800	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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