Variant report

Variant	rs212766
Chromosome Location	chr6:133788976-133788977
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 12 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:12)

rs_ID	r²[population]
rs212765	1.00[CEU][hapmap];0.89[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs212771	0.81[EUR][1000 genomes]
rs212773	1.00[CEU][hapmap];0.82[AMR][1000 genomes];0.88[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs212774	1.00[CEU][hapmap];0.88[EUR][1000 genomes]
rs212775	0.83[EUR][1000 genomes]
rs212776	0.96[CEU][hapmap];0.82[EUR][1000 genomes]
rs212777	0.96[CEU][hapmap];0.84[EUR][1000 genomes]
rs2277083	0.83[CEU][hapmap]
rs3822939	0.84[CEU][hapmap]
rs561826	0.84[CEU][hapmap]
rs598286	0.82[EUR][1000 genomes]
rs6913726	0.84[CEU][hapmap]

No data

Chromatin state (count:20 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:133765800-133822000	Weak transcription	Psoas Muscle	Psoas
2	chr6:133778400-133789000	Weak transcription	Cortex derived primary cultured neurospheres	brain
3	chr6:133780800-133796800	Weak transcription	NHLF	lung
4	chr6:133782000-133789600	Weak transcription	Skeletal Muscle Female	skeletal muscle
5	chr6:133782000-133790400	Weak transcription	Skeletal Muscle Male	skeletal muscle
6	chr6:133782000-133811600	Weak transcription	A549	lung
7	chr6:133782200-133790000	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
8	chr6:133782400-133806400	Weak transcription	Fetal Muscle Leg	muscle
9	chr6:133784000-133813000	Weak transcription	HSMMtube	muscle
10	chr6:133784200-133789400	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
11	chr6:133786600-133812400	Weak transcription	Fetal Kidney	kidney
12	chr6:133786800-133807400	Weak transcription	Fetal Muscle Trunk	muscle
13	chr6:133787400-133789800	Enhancers	NH-A	brain
14	chr6:133787400-133790400	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
15	chr6:133787400-133822800	Weak transcription	Fetal Lung	lung
16	chr6:133787600-133789800	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
17	chr6:133787800-133789400	Enhancers	Fetal Adrenal Gland	Adrenal Gland
18	chr6:133787800-133789800	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
19	chr6:133788400-133789600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
20	chr6:133788600-133789200	Weak transcription	Hela-S3	cervix

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