The 2.0 version of rSNPBase

Variant report

Variant rs2129644
Chromosome Location chr10:46020999-46021000
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:43 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:45999000-46025600 Weak transcription Primary hematopoietic stem cells blood
2 chr10:46005000-46025200 Weak transcription Primary B cells from peripheral blood blood
3 chr10:46005400-46029800 Weak transcription Fetal Kidney kidney
4 chr10:46007600-46021600 Weak transcription Primary hematopoietic stem cells short term culture blood
5 chr10:46007800-46027400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
6 chr10:46008400-46027200 Weak transcription Rectal Mucosa Donor 29 rectum
7 chr10:46008800-46021800 Weak transcription Spleen Spleen
8 chr10:46009000-46021000 Weak transcription Primary T helper cells PMA-I stimulated --
9 chr10:46009400-46044400 Weak transcription Thymus Thymus
10 chr10:46010000-46021600 Weak transcription Right Atrium heart
11 chr10:46010000-46027800 Weak transcription Lung lung
12 chr10:46010000-46056000 Weak transcription Esophagus oesophagus
13 chr10:46010200-46027200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
14 chr10:46010200-46028800 Weak transcription Rectal Smooth Muscle rectum
15 chr10:46010800-46021600 Weak transcription Fetal Muscle Leg muscle
16 chr10:46010800-46025600 Weak transcription Breast Myoepithelial Primary Cells Breast
17 chr10:46011000-46025400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
18 chr10:46011400-46021600 Weak transcription Brain Inferior Temporal Lobe brain
19 chr10:46011400-46027200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
20 chr10:46011600-46030200 Weak transcription HepG2 liver
21 chr10:46011800-46021600 Weak transcription Brain Hippocampus Middle brain
22 chr10:46013200-46027400 Weak transcription Left Ventricle heart
23 chr10:46014000-46027400 Weak transcription Fetal Intestine Small intestine
24 chr10:46014400-46070000 Weak transcription Psoas Muscle Psoas
25 chr10:46015000-46025600 Weak transcription Primary T helper cells fromperipheralblood blood
26 chr10:46015400-46025800 Weak transcription Primary T cells fromperipheralblood blood
27 chr10:46015600-46026000 Weak transcription Aorta Aorta
28 chr10:46015600-46043400 Weak transcription Primary T helper naive cells fromperipheralblood blood
29 chr10:46016000-46022800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
30 chr10:46016000-46027400 Weak transcription Sigmoid Colon Sigmoid Colon
31 chr10:46016200-46027400 Weak transcription Liver Liver
32 chr10:46017200-46027000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
33 chr10:46017800-46027200 Weak transcription Rectal Mucosa Donor 31 rectum
34 chr10:46017800-46029600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
35 chr10:46018000-46021600 Weak transcription Ovary ovary
36 chr10:46018000-46052800 Weak transcription Primary T helper naive cells from peripheral blood blood
37 chr10:46018400-46027200 Weak transcription Primary T regulatory cells fromperipheralblood blood
38 chr10:46018400-46040400 Weak transcription K562 blood
39 chr10:46018800-46027600 Weak transcription Primary T killer memory cells from peripheral blood blood
40 chr10:46019200-46022000 Strong transcription Primary T cells from cord blood blood
41 chr10:46019200-46039200 Weak transcription Fetal Intestine Large intestine
42 chr10:46019800-46021800 Strong transcription Primary B cells from cord blood blood
43 chr10:46020600-46021000 Weak transcription Pancreatic Islets Pancreatic Islet

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Last update: Aug 31, 2015