Variant report

Variant	rs2131455
Chromosome Location	chr4:95506399-95506400
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr4:95498533..95501686-chr4:95504980..95507488,3	K562	blood:

Variant related genes	Relation type
ENSG00000163110	Chromatin interaction

Extended variants
information (count: 12 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs10001372	1.00[EUR][1000 genomes]
rs10033359	1.00[EUR][1000 genomes]
rs10856910	1.00[EUR][1000 genomes]
rs1389161	1.00[EUR][1000 genomes]
rs2452595	1.00[EUR][1000 genomes]
rs2452596	1.00[EUR][1000 genomes]
rs3857212	1.00[EUR][1000 genomes]
rs4699303	1.00[EUR][1000 genomes]
rs6822264	1.00[EUR][1000 genomes]
rs72888656	1.00[ASN][1000 genomes]
rs966845	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv932216	chr4:95501261-96109807	Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Weak transcription Genic enhancers Strong transcription Active TSS Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	9 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:104 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:95483400-95524400	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
2	chr4:95484000-95507400	Weak transcription	Hela-S3	cervix
3	chr4:95489000-95507400	Weak transcription	Primary B cells from peripheral blood	blood
4	chr4:95489200-95506800	Weak transcription	Primary T helper cells fromperipheralblood	blood
5	chr4:95489200-95507400	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
6	chr4:95489200-95509800	Weak transcription	Primary T helper cells PMA-I stimulated	--
7	chr4:95489600-95508200	Weak transcription	GM12878-XiMat	blood
8	chr4:95489600-95522800	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
9	chr4:95489600-95539200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
10	chr4:95493200-95540200	Weak transcription	Small Intestine	intestine
11	chr4:95493200-95584800	Weak transcription	Primary B cells from cord blood	blood
12	chr4:95495200-95506800	Weak transcription	Fetal Stomach	stomach
13	chr4:95497200-95506400	Weak transcription	Left Ventricle	heart
14	chr4:95497200-95506800	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
15	chr4:95497200-95506800	Weak transcription	Psoas Muscle	Psoas
16	chr4:95497200-95507400	Weak transcription	Primary T cells from cord blood	blood
17	chr4:95497200-95511000	Weak transcription	Ovary	ovary
18	chr4:95497200-95512600	Weak transcription	Aorta	Aorta
19	chr4:95497200-95512600	Weak transcription	Pancreas	Pancrea
20	chr4:95497200-95513800	Weak transcription	Right Ventricle	heart
21	chr4:95497200-95516200	Weak transcription	Right Atrium	heart
22	chr4:95497200-95520000	Weak transcription	Spleen	Spleen
23	chr4:95497200-95524600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
24	chr4:95497200-95524600	Weak transcription	Gastric	stomach
25	chr4:95497200-95524600	Weak transcription	Lung	lung
26	chr4:95497200-95526000	Weak transcription	Brain Angular Gyrus	brain
27	chr4:95497200-95553000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
28	chr4:95497200-95569400	Weak transcription	Esophagus	oesophagus
29	chr4:95497400-95506800	Weak transcription	Primary neutrophils fromperipheralblood	blood
30	chr4:95497400-95506800	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
31	chr4:95497400-95506800	Weak transcription	Adipose Nuclei	Adipose
32	chr4:95497400-95507600	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
33	chr4:95497400-95510200	Weak transcription	Fetal Kidney	kidney
34	chr4:95497400-95513600	Weak transcription	Primary hematopoietic stem cells short term culture	blood
35	chr4:95497400-95515000	Weak transcription	Colonic Mucosa	Colon
36	chr4:95497400-95524200	Weak transcription	NHLF	lung
37	chr4:95497400-95526200	Weak transcription	Brain Hippocampus Middle	brain
38	chr4:95497400-95542000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
39	chr4:95497600-95506600	Weak transcription	Placenta	Placenta
40	chr4:95497600-95506800	Weak transcription	Fetal Muscle Leg	muscle
41	chr4:95497600-95507600	Weak transcription	K562	blood
42	chr4:95497600-95509200	Weak transcription	Placenta Amnion	Placenta Amnion
43	chr4:95497600-95510400	Weak transcription	Primary T cells fromperipheralblood	blood
44	chr4:95497600-95513600	Weak transcription	Fetal Muscle Trunk	muscle
45	chr4:95497600-95539200	Weak transcription	HepG2	liver
46	chr4:95497800-95507400	Weak transcription	Primary hematopoietic stem cells	blood
47	chr4:95497800-95508800	Weak transcription	Fetal Thymus	thymus
48	chr4:95498000-95506800	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
49	chr4:95498000-95506800	Weak transcription	Duodenum Mucosa	Duodenum
50	chr4:95498000-95506800	Weak transcription	HMEC	breast

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