Variant report

Variant	rs2135546
Chromosome Location	chr12:45278173-45278174
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 45 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:45)

rs_ID	r²[population]
rs10506260	0.86[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs11609078	0.82[CEU][hapmap];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11609889	0.86[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs11612170	1.00[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs11612586	0.97[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs11613494	0.94[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs11614127	1.00[CEU][hapmap]
rs11614600	0.84[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs11615455	0.84[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs12810186	0.94[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs12811419	0.92[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs12811488	1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs12813393	0.93[EUR][1000 genomes]
rs12816104	0.83[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs12816234	0.94[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs12816596	0.97[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12818196	0.89[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs12822209	0.84[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs12822384	1.00[CEU][hapmap]
rs12829582	0.84[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs12830481	1.00[CEU][hapmap];0.84[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs12831193	1.00[CEU][hapmap];0.86[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs1605295	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17095316	0.92[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs17598279	1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs28696281	0.84[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs34073769	0.86[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs34089464	0.86[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs34568257	0.84[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs34608296	0.84[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs34685472	0.86[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs35018588	0.89[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs35256979	0.94[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs35374916	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs35514455	0.84[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs35555451	0.86[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs35781370	0.86[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs35799097	0.84[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs35939831	0.84[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs71459269	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs71459270	0.89[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs71459276	0.81[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs71459279	1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs71459290	0.92[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs71459292	0.89[AMR][1000 genomes];0.85[EUR][1000 genomes]

No data

Chromatin state (count:0 , 50 per page) page:

No data

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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