Variant report

Variant	rs2137547
Chromosome Location	chr12:26261873-26261874
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 6 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:6)

rs_ID	r²[population]
rs17365537	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2343072	0.94[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.88[MEX][hapmap];0.88[AMR][1000 genomes];0.82[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs55694223	0.91[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61915685	0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs61915687	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7300076	0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:26251000-26265800	Weak transcription	HSMM	muscle
2	chr12:26255600-26264400	Weak transcription	Fetal Intestine Small	intestine
3	chr12:26257400-26262200	Enhancers	Skeletal Muscle Male	skeletal muscle
4	chr12:26258000-26262200	Weak transcription	HUES6 Cell Line	embryonic stem cell
5	chr12:26258200-26265000	Weak transcription	Fetal Intestine Large	intestine
6	chr12:26259000-26262200	Enhancers	Skeletal Muscle Female	skeletal muscle
7	chr12:26261000-26262000	Weak transcription	Psoas Muscle	Psoas
8	chr12:26261800-26262600	Enhancers	iPS-18 Cell Line	embryonic stem cell
9	chr12:26261800-26262600	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
10	chr12:26261800-26263600	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
11	chr12:26261800-26263600	Enhancers	Adipose Nuclei	Adipose
12	chr12:26261800-26263800	Enhancers	Fetal Muscle Leg	muscle

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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