The 2.0 version of rSNPBase

Variant report

Variant rs214060
Chromosome Location chr6:25537194-25537195
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:64 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:25471600-25597200 Weak transcription Gastric stomach
2 chr6:25490400-25543000 Weak transcription Hela-S3 cervix
3 chr6:25494000-25551400 Weak transcription Left Ventricle heart
4 chr6:25506600-25537400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
5 chr6:25509800-25548600 Weak transcription Primary T killer naive cells fromperipheralblood blood
6 chr6:25514200-25542600 Weak transcription Adipose Nuclei Adipose
7 chr6:25514200-25558400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
8 chr6:25514400-25541600 Weak transcription Colonic Mucosa Colon
9 chr6:25514800-25537800 Weak transcription Primary B cells from peripheral blood blood
10 chr6:25515000-25538600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
11 chr6:25516200-25547000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
12 chr6:25516200-25556800 Weak transcription Pancreas Pancrea
13 chr6:25516400-25556800 Weak transcription Fetal Stomach stomach
14 chr6:25516600-25539600 Weak transcription HUES6 Cell Line embryonic stem cell
15 chr6:25516600-25544000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
16 chr6:25516800-25537200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
17 chr6:25516800-25545200 Weak transcription iPS-18 Cell Line embryonic stem cell
18 chr6:25516800-25606400 Weak transcription Lung lung
19 chr6:25517000-25542200 Weak transcription Primary T cells fromperipheralblood blood
20 chr6:25517400-25540200 Weak transcription Placenta Amnion Placenta Amnion
21 chr6:25517400-25542200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
22 chr6:25519000-25540000 Weak transcription HUES64 Cell Line embryonic stem cell
23 chr6:25519000-25540000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
24 chr6:25519800-25543200 Weak transcription Primary hematopoietic stem cells blood
25 chr6:25519800-25556800 Weak transcription Ovary ovary
26 chr6:25521600-25541000 Weak transcription HSMMtube muscle
27 chr6:25521600-25541000 Weak transcription NHEK skin
28 chr6:25522200-25545400 Weak transcription Small Intestine intestine
29 chr6:25522400-25538600 Weak transcription Primary T helper naive cells fromperipheralblood blood
30 chr6:25522400-25588600 Weak transcription HMEC breast
31 chr6:25522600-25537400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
32 chr6:25522800-25540000 Weak transcription HUES48 Cell Line embryonic stem cell
33 chr6:25523000-25550600 Weak transcription Primary T helper cells PMA-I stimulated --
34 chr6:25523000-25577200 Weak transcription Sigmoid Colon Sigmoid Colon
35 chr6:25523200-25538000 Weak transcription Thymus Thymus
36 chr6:25523200-25541400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
37 chr6:25523400-25538400 Weak transcription iPS-20b Cell Line embryonic stem cell
38 chr6:25523400-25544200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
39 chr6:25525000-25538600 Weak transcription Rectal Mucosa Donor 29 rectum
40 chr6:25525400-25538400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
41 chr6:25527800-25540400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
42 chr6:25529400-25538000 Weak transcription Primary T helper cells fromperipheralblood blood
43 chr6:25530600-25539000 Weak transcription Cortex derived primary cultured neurospheres brain
44 chr6:25530800-25537600 Weak transcription Fetal Kidney kidney
45 chr6:25530800-25584200 Weak transcription Fetal Intestine Small intestine
46 chr6:25531200-25538000 Weak transcription Fetal Thymus thymus
47 chr6:25533000-25541400 Strong transcription Primary T cells from cord blood blood
48 chr6:25533600-25539000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
49 chr6:25534400-25537800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
50 chr6:25534400-25538600 Strong transcription Rectal Mucosa Donor 31 rectum

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Last update: Aug 31, 2015