Variant report

Variant	rs2148312
Chromosome Location	chr10:91424024-91424025
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Variant related genes	Relation type
ENSG00000138182	Chromatin interaction
ENSG00000249962	Chromatin interaction
ENSG00000232936	Chromatin interaction
ENSG00000152782	Chromatin interaction
ENSG00000235100	Chromatin interaction

Extended variants
information (count: 2 )
Associated
traits (count: 4 )

rSNPs within LD-proxies of this variant (count:2)

rs_ID	r²[population]
rs4933510	1.00[ASW][hapmap];0.84[CEU][hapmap];1.00[GIH][hapmap];1.00[MKK][hapmap];0.87[TSI][hapmap];0.90[AFR][1000 genomes];0.89[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs7079243	0.82[ASW][hapmap]

mRNA abundance (count:4)

SNP	Gene	Cis/trans	Tissue	Source
rs2148312	FAS	cis	parietal	SCAN
rs2148312	ANKRD22	cis	cerebellum	SCAN
rs2148312	FGFBP3	cis	parietal	SCAN
rs2148312	LIPM	cis	cerebellum	SCAN

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:91422600-91424400	Enhancers	Fetal Heart	heart
2	chr10:91422600-91425000	Enhancers	Psoas Muscle	Psoas
3	chr10:91422600-91425000	Enhancers	Skeletal Muscle Male	skeletal muscle
4	chr10:91423400-91425400	Enhancers	HSMMtube	muscle
5	chr10:91423600-91425400	Enhancers	Fetal Muscle Leg	muscle
6	chr10:91423800-91424600	Enhancers	Fetal Adrenal Gland	Adrenal Gland
7	chr10:91423800-91425000	Enhancers	Skeletal Muscle Female	skeletal muscle
8	chr10:91424000-91424600	Enhancers	Rectal Mucosa Donor 31	rectum

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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